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The map label for this gene is puuD [H]

Identifier: 209550951

GI number: 209550951

Start: 3488033

End: 3488812

Strand: Direct

Name: puuD [H]

Synonym: Rleg2_3375

Alternate gene names: 209550951

Gene position: 3488033-3488812 (Clockwise)

Preceding gene: 209550949

Following gene: 209550959

Centisome position: 76.86

GC content: 66.28

Gene sequence:

>780_bases
ATGACGAAACCGATCGTTGCCATTCCTGCCGATATCCGCAGCTTTGACGGCGCAACCTGGCATGCCGTGCAGCATCAATA
TCTGCGTGCCGCCTTGAATGCGGCCGGCGTCATGGCCTTCATCATCCCGGCTTTCGAGGCAGGCTACGATACCGACGCGA
TCCTCGACCGCGTCGACGGCCTCCTCGTTTCCGGCTCGGCCAGCAACGTGCACCCCTCGCTCTACGGTGCCGAGGCCAAT
GACAAGGACGGCCCCTTCGACCCCGCCCGCGACGCCACCAGCCTGCCGCTGATCCGCCGCGCCCTCGACCGCGCCATCCC
GCTGCTCGCCATCTGCCGCGGCATCCAGGAGCTGAACGTCGCGCTCGGCGGTTCGCTGGCAAGCGAGATCCAGGAGCAGC
CCGGCATTTGGGACCATCGCCGGCCGGACGGCGTCGACCGCGACGGCATGTATGCCATTCGTCAAAGCGTCCACGTCAAG
GAAGGCTCCTGCATCGCAAGCATTCTCGGCCCCGGCGAGGTCCGCGTGAATTCCCTGCATCGGCAGGCGATTGCCAGGAC
CGCCCCGCGCCTGCAGGTGGAAGCGATCGCCGAAGACGGCACCGTGGAAGCCGTCTCCGTCATCGACGCCAAAGCCTTCG
CCGTCGGCGTGCAATGGCATCCGGAATACTGGGCCGAAACCGACAAGCCTTCGAACCAGCTATTTGAAGCTTTCGGCGAC
GCCGTCCGCACCTATGCCGCCGGCAAGCTGCCGGTCACCCCCGCGCAGGCGATCGCCTGA

Upstream 100 bases:

>100_bases
GCTTCGGCCGTATTTTGGCCACCTGACACAGCCAAGCGTTGACTTAAGGGCCGTTCTGGCGCCAGAAACGCTGTGCAGAA
AGATTTTTACCGGGGTTGAT

Downstream 100 bases:

>100_bases
CGGCGCGGCACCGGCGCGCTATCAGCCCGCCAAGCGTTGAACACACCATCAATGGTGATCGTCGTCCTCGTCGTCATGCT
CGTGCTTGAGCCAGGTGCAG

Product: peptidase C26

Products: NA

Alternate protein names: Gamma-Glu-GABA hydrolase [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTKPIVAIPADIRSFDGATWHAVQHQYLRAALNAAGVMAFIIPAFEAGYDTDAILDRVDGLLVSGSASNVHPSLYGAEAN
DKDGPFDPARDATSLPLIRRALDRAIPLLAICRGIQELNVALGGSLASEIQEQPGIWDHRRPDGVDRDGMYAIRQSVHVK
EGSCIASILGPGEVRVNSLHRQAIARTAPRLQVEAIAEDGTVEAVSVIDAKAFAVGVQWHPEYWAETDKPSNQLFEAFGD
AVRTYAAGKLPVTPAQAIA

Sequences:

>Translated_259_residues
MTKPIVAIPADIRSFDGATWHAVQHQYLRAALNAAGVMAFIIPAFEAGYDTDAILDRVDGLLVSGSASNVHPSLYGAEAN
DKDGPFDPARDATSLPLIRRALDRAIPLLAICRGIQELNVALGGSLASEIQEQPGIWDHRRPDGVDRDGMYAIRQSVHVK
EGSCIASILGPGEVRVNSLHRQAIARTAPRLQVEAIAEDGTVEAVSVIDAKAFAVGVQWHPEYWAETDKPSNQLFEAFGD
AVRTYAAGKLPVTPAQAIA
>Mature_258_residues
TKPIVAIPADIRSFDGATWHAVQHQYLRAALNAAGVMAFIIPAFEAGYDTDAILDRVDGLLVSGSASNVHPSLYGAEAND
KDGPFDPARDATSLPLIRRALDRAIPLLAICRGIQELNVALGGSLASEIQEQPGIWDHRRPDGVDRDGMYAIRQSVHVKE
GSCIASILGPGEVRVNSLHRQAIARTAPRLQVEAIAEDGTVEAVSVIDAKAFAVGVQWHPEYWAETDKPSNQLFEAFGDA
VRTYAAGKLPVTPAQAIA

Specific function: Involved in the breakdown of putrescine via hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma- aminobutyrate [H]

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=250, Percent_Identity=39.2, Blast_Score=167, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: =3.5.1.94 [H]

Molecular weight: Translated: 27737; Mature: 27605

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPIVAIPADIRSFDGATWHAVQHQYLRAALNAAGVMAFIIPAFEAGYDTDAILDRVDG
CCCCEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
LLVSGSASNVHPSLYGAEANDKDGPFDPARDATSLPLIRRALDRAIPLLAICRGIQELNV
EEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGGSLASEIQEQPGIWDHRRPDGVDRDGMYAIRQSVHVKEGSCIASILGPGEVRVNSLH
HHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
RQAIARTAPRLQVEAIAEDGTVEAVSVIDAKAFAVGVQWHPEYWAETDKPSNQLFEAFGD
HHHHHHCCCCEEEEEECCCCCEEHHHHHHHHEEEEEEEECCHHHCCCCCCHHHHHHHHHH
AVRTYAAGKLPVTPAQAIA
HHHHHHCCCCCCCHHHHCC
>Mature Secondary Structure 
TKPIVAIPADIRSFDGATWHAVQHQYLRAALNAAGVMAFIIPAFEAGYDTDAILDRVDG
CCCEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
LLVSGSASNVHPSLYGAEANDKDGPFDPARDATSLPLIRRALDRAIPLLAICRGIQELNV
EEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGGSLASEIQEQPGIWDHRRPDGVDRDGMYAIRQSVHVKEGSCIASILGPGEVRVNSLH
HHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
RQAIARTAPRLQVEAIAEDGTVEAVSVIDAKAFAVGVQWHPEYWAETDKPSNQLFEAFGD
HHHHHHCCCCEEEEEECCCCCEEHHHHHHHHEEEEEEEECCHHHCCCCCCHHHHHHHHHH
AVRTYAAGKLPVTPAQAIA
HHHHHHCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]