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The map label for this gene is 209550801

Identifier: 209550801

GI number: 209550801

Start: 3311184

End: 3312566

Strand: Reverse

Name: 209550801

Synonym: Rleg2_3225

Alternate gene names: NA

Gene position: 3312566-3311184 (Counterclockwise)

Preceding gene: 209550802

Following gene: 209550792

Centisome position: 73.0

GC content: 62.47

Gene sequence:

>1383_bases
ATGATCAGGACAATCCTTCTTGCCACGGCATGCGCCTGCATGCTCGCGGCCGCACCTGCACGCGCCGCTGAGGAAACCAC
GCAGAGCTTTGAAACCGGGCTCATCCCGTCGCCGCACATCTTCCTGCCGGAAGGTGAGGTGAAGGGCACGGTGATGCTGA
TCTCGGATGCCGCCGGCTGGGGCGACTATGAGAAGGGGGAGGCCGACAGGCTGGTCGCCGAAGGCGCCGTCGTCATCGGC
GTCGATTTTCCCTCCTATATCCAGGCGCTCGACCGCTACGACGTCAGCCTCAATGACGGCTGTCTCTACATGGTTTCGGA
TATCGAATCGCTGAGCCAGCAGGTGCAGCGTGCGACCGGCAACAACGCCTATCACCTGCCGATCGTCGCCGGCATCGGCG
AGGGTGGAGCCCTGGCGCTGGCGATCGCCGCGCAGACGCCGGATGCGACGATCGGTCAGACGCTTGCCGTCGATCCGCTC
GCCGGAATTCCCCTTGCCAAGGAGCTTTGCACTCCGGCGTCCAAGAAAGTGGTGGGGCAACGCACGGTGTATGGCCTCAG
CGAGGGAGCCCTGCCGGATCCTGTTGTCTCCGTCTTCACGCCCAAGGCCGACAAGGACGGCCGGGCGCATGTCGAGGCAC
TGAAGAAGACCCATGCCGCGATCGAAATTCGCGATTCCACCGACGACGCGCAGACGGTGTTTGCCGATACGCTTGACGAT
CTCGTCACCGCCTCCGGCGCTTTCGGCAATCCGCTCGGACTGCCGCTGGCGATCCTGGAGGCGACGCCCGCCCTCGATAC
GATGGCGGTGATCTATTCCGGCGACGGCGGCTGGCGCGACATCGACAAGGAGGTCGGCGGCACGCTGCAGAAGGAAGGCA
TTCCGGTCGTCGGCGTCGATTCGCTTCACTATTTCTGGTCGGAGCGCAAGCCGGAGGAGACGGCCGCCGACCTTTCGAAG
ATCATCGATTTCTACCGGAAGCAGTGGAAGGTGAAGCATGTGCTGCTCGTCGGTTATTCCTTCGGCGCCGACGTCGTGCC
CGCCACCTATCAGCTCCTCAAACCGGCAGAAAAGTCGGCGGTGGCGCAATTGTCGTTGCTGTCGCTCTCGCACCAGGTCG
ACTACGTCATCTCCGTTCTCGGCTGGCTCGGCCAGAAGACGGAAGGGGCTGGAGGCGATCCCGTCGCCGATCTGAAGAAT
ATCGATCCGAAGCTCGTGCAATGCATCTACGGCAAGGACGACGATGACGATGTCGCCTGCCCGGCGCTGAAGGATAGCGG
CGCCGAGGTGATCGAACTGCCCGGCGACCATCACTTCGACGAGAATTACGATCTTCTCACCAAGATGATCATCGACGGGC
TGAAAAAGCGGCTGCAGAATTAA

Upstream 100 bases:

>100_bases
AACCGCGCTATCTTGCGGTCTCCGGAGGGGGCAATCCGATGATCGCGTTGATGGACGCGACATTTCTGATCGGGGGCGGA
TTGAAAGGGGTAGTGAGAAA

Downstream 100 bases:

>100_bases
CGCATCAGCATTTCTTCGCTCCAGTCGAGCCCGGCGAGCTCCTCGCCGCGGAACTGGGCGTCGTCGGCGACGATGAACTC
GTCGAGCTGCGGCGGAGCGA

Product: virulence factor family protein

Products: NA

Alternate protein names: Virulence Protein; Acid lerance Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Type IV Secretion System VirJ-Like Protein; AcvB-Related Protein; Acid Virulence Protein B; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MIRTILLATACACMLAAAPARAAEETTQSFETGLIPSPHIFLPEGEVKGTVMLISDAAGWGDYEKGEADRLVAEGAVVIG
VDFPSYIQALDRYDVSLNDGCLYMVSDIESLSQQVQRATGNNAYHLPIVAGIGEGGALALAIAAQTPDATIGQTLAVDPL
AGIPLAKELCTPASKKVVGQRTVYGLSEGALPDPVVSVFTPKADKDGRAHVEALKKTHAAIEIRDSTDDAQTVFADTLDD
LVTASGAFGNPLGLPLAILEATPALDTMAVIYSGDGGWRDIDKEVGGTLQKEGIPVVGVDSLHYFWSERKPEETAADLSK
IIDFYRKQWKVKHVLLVGYSFGADVVPATYQLLKPAEKSAVAQLSLLSLSHQVDYVISVLGWLGQKTEGAGGDPVADLKN
IDPKLVQCIYGKDDDDDVACPALKDSGAEVIELPGDHHFDENYDLLTKMIIDGLKKRLQN

Sequences:

>Translated_460_residues
MIRTILLATACACMLAAAPARAAEETTQSFETGLIPSPHIFLPEGEVKGTVMLISDAAGWGDYEKGEADRLVAEGAVVIG
VDFPSYIQALDRYDVSLNDGCLYMVSDIESLSQQVQRATGNNAYHLPIVAGIGEGGALALAIAAQTPDATIGQTLAVDPL
AGIPLAKELCTPASKKVVGQRTVYGLSEGALPDPVVSVFTPKADKDGRAHVEALKKTHAAIEIRDSTDDAQTVFADTLDD
LVTASGAFGNPLGLPLAILEATPALDTMAVIYSGDGGWRDIDKEVGGTLQKEGIPVVGVDSLHYFWSERKPEETAADLSK
IIDFYRKQWKVKHVLLVGYSFGADVVPATYQLLKPAEKSAVAQLSLLSLSHQVDYVISVLGWLGQKTEGAGGDPVADLKN
IDPKLVQCIYGKDDDDDVACPALKDSGAEVIELPGDHHFDENYDLLTKMIIDGLKKRLQN
>Mature_460_residues
MIRTILLATACACMLAAAPARAAEETTQSFETGLIPSPHIFLPEGEVKGTVMLISDAAGWGDYEKGEADRLVAEGAVVIG
VDFPSYIQALDRYDVSLNDGCLYMVSDIESLSQQVQRATGNNAYHLPIVAGIGEGGALALAIAAQTPDATIGQTLAVDPL
AGIPLAKELCTPASKKVVGQRTVYGLSEGALPDPVVSVFTPKADKDGRAHVEALKKTHAAIEIRDSTDDAQTVFADTLDD
LVTASGAFGNPLGLPLAILEATPALDTMAVIYSGDGGWRDIDKEVGGTLQKEGIPVVGVDSLHYFWSERKPEETAADLSK
IIDFYRKQWKVKHVLLVGYSFGADVVPATYQLLKPAEKSAVAQLSLLSLSHQVDYVISVLGWLGQKTEGAGGDPVADLKN
IDPKLVQCIYGKDDDDDVACPALKDSGAEVIELPGDHHFDENYDLLTKMIIDGLKKRLQN

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48969; Mature: 48969

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTILLATACACMLAAAPARAAEETTQSFETGLIPSPHIFLPEGEVKGTVMLISDAAGW
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEECCCCC
GDYEKGEADRLVAEGAVVIGVDFPSYIQALDRYDVSLNDGCLYMVSDIESLSQQVQRATG
CCCCCCCHHHHEECCEEEEEECCHHHHHHHHHCCCEECCCEEEEHHHHHHHHHHHHHHCC
NNAYHLPIVAGIGEGGALALAIAAQTPDATIGQTLAVDPLAGIPLAKELCTPASKKVVGQ
CCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHCCCHHHHHHCC
RTVYGLSEGALPDPVVSVFTPKADKDGRAHVEALKKTHAAIEIRDSTDDAQTVFADTLDD
HHEEECCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHH
LVTASGAFGNPLGLPLAILEATPALDTMAVIYSGDGGWRDIDKEVGGTLQKEGIPVVGVD
HHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHCCCHHHCCCCEEECC
SLHYFWSERKPEETAADLSKIIDFYRKQWKVKHVLLVGYSFGADVVPATYQLLKPAEKSA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCHHHHHHHHCCHHHHH
VAQLSLLSLSHQVDYVISVLGWLGQKTEGAGGDPVADLKNIDPKLVQCIYGKDDDDDVAC
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCC
PALKDSGAEVIELPGDHHFDENYDLLTKMIIDGLKKRLQN
CCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRTILLATACACMLAAAPARAAEETTQSFETGLIPSPHIFLPEGEVKGTVMLISDAAGW
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEECCCCC
GDYEKGEADRLVAEGAVVIGVDFPSYIQALDRYDVSLNDGCLYMVSDIESLSQQVQRATG
CCCCCCCHHHHEECCEEEEEECCHHHHHHHHHCCCEECCCEEEEHHHHHHHHHHHHHHCC
NNAYHLPIVAGIGEGGALALAIAAQTPDATIGQTLAVDPLAGIPLAKELCTPASKKVVGQ
CCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHCCCHHHHHHCC
RTVYGLSEGALPDPVVSVFTPKADKDGRAHVEALKKTHAAIEIRDSTDDAQTVFADTLDD
HHEEECCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHH
LVTASGAFGNPLGLPLAILEATPALDTMAVIYSGDGGWRDIDKEVGGTLQKEGIPVVGVD
HHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHCCCHHHCCCCEEECC
SLHYFWSERKPEETAADLSKIIDFYRKQWKVKHVLLVGYSFGADVVPATYQLLKPAEKSA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCHHHHHHHHCCHHHHH
VAQLSLLSLSHQVDYVISVLGWLGQKTEGAGGDPVADLKNIDPKLVQCIYGKDDDDDVAC
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCC
PALKDSGAEVIELPGDHHFDENYDLLTKMIIDGLKKRLQN
CCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA