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The map label for this gene is mcpA [H]

Identifier: 209550792

GI number: 209550792

Start: 3303619

End: 3305934

Strand: Reverse

Name: mcpA [H]

Synonym: Rleg2_3216

Alternate gene names: 209550792

Gene position: 3305934-3303619 (Counterclockwise)

Preceding gene: 209550801

Following gene: 209550791

Centisome position: 72.85

GC content: 62.82

Gene sequence:

>2316_bases
ATGGCACAGAGATTTCAATCCCTGTCCTTCAAGGTCATTGCCACATTCATTCTGCTGACGGTGCTGTCGATCGCAGTGAT
CGACGTGCTTGCCTATTTCGCCAGCAGCCGGATCTCCGACGAGCAGGCGCTGAAAGCCAAGGAGAGCGTGCTGATCTTTC
GCGGCGACATGCTGCAGGACCAGCTGACGCAGCTTGAAAACCAGGCGACGTCGATTGCGCGTATCGAAGCGCTGCAGATG
TCGATCACCAGCCTGAAAAGCGGTTGGAAGACGATCGAGAAGACCTCCGGCGATGCCCGGGCCGAGTTGAAGAAGGTTTT
CATCTCCGGCAATCCCAACCCGGCAGACCAGCGCGAGAAACTGATGAAGCCGGAAGGGCCGAGCGGCTTTTATTATTCGA
ACCACGAGAAGACGCAGGGGGAAGTCGCCCGCGACCTCGCAGATACCGCCTTCAGCGATCTGCTGATCGCCGATCTCGAC
GGCACCGTCCTCTATTCCTACAAGAAGCAGGACGACTTCGCCGAGAATCTGAAGACGGATGCCTGGAAGGCAACCGGTGC
CGGTATCGCTTTCGCCAAGGCAATCGAGAATACCGCCAAAGCGACGGATGATGCCGCACCGACAGGTTTTTCCGGCCTTC
GCGTCGATGCCGCCAGCGGCAATTCGGCGATCTTCTATGCCGTGCCGATCGTCAAGCTTGGCGCTGCCAAGGGCATCATT
CTCTTCAAGGTGCGCGACGACATCGTCACCGGCATCCTTGCCAAAGGCATCGTCCAGGGCAGCACGGCGCGGGCGGCGAT
AGTTTCCAGCGATGGGTCGGCCATCGGGCTCGACGCGAATGGCAGGCTTGCAACGCTCGATGCGACACCCTTCACTTTCA
TCAAGGACGCGCTTGCCAGTTCGGCGATGACGGTTGCCGATTTCGACAGGGTGGATGGGCCGGCCCGCGCCTATGTCCGC
GGTATCGACTATCGCGGCGACCGCTTCCTCGTCATCGAGAGCGTGCTGCTCAGTGATCTCAATGCCGGTTCGATCGAGAT
TGCCACTTTGCTGACGATGATCGGCATCGGTGTGCTCGTCGTCATGGCGATTGCCACCGGGCTCGTCACCAATTTCCTGT
TCTCGCCGCTTGCGCGGCTTGCCGGTGTGACCCGCGACGTCGCCGACGGCAAGCTCGACAGCGAGATCGGCAGCCTGAAC
CGCAAGGATGAGATCGGCACGATGGCCAATGCGCTCGCCCGCTTCCGGCAATCGCTGATAGAGAGCCGCGAACTCGAAGC
CGCCAGCGAAGAGACGCGCCTGCAGGCCGAGCAGGATCGCCAGCAGAATCTGGCCGAGCGCGAAGCCGAGGCGAAGACGC
TGCAGCAGGTGGTCGAGGCGATCGACGAAGGCCTGCATCATCTGGCCAGCGGCGATCTTGCCTATCAGATCGATACGCGC
TTCCCGAACGAGCTCGAAAGCCTGCGCATCAATTTCAACGAGGCGCTCGCGACGCTCAGCGAAACCATGACGGCCATCGG
CGGCAACTCGATGGCGGTGCGCGCCGGCTCCGAGGAAATGCGCACCGGCGCGGACGAGCTTGCCGGGCGTACTGAGCGTC
AGGCCGGCTCGATCACCGAGACGGCGAATGCGATCAGCGCCATCACCCAGTCCGTCCGCCGGCAGATCGAGCGGGCCGAA
CAGGCCGAGCGCATCGCCCGCGACGCCAAGAAGGAGACGACCGGCTCCGGCCAGATCATGCGCGAGACGATTGCGGCGAT
GGAGGCGATCCAGACCTCCTCGCGCCAGATCAACACGATCATCTCGGTCATCGACGACATCGCCTTCCAGACCAACCTGC
TGGCGCTCAATGCCGGCGTCGAGGCAGCGCGCGCCGGTGAATCGGGCAAGGGCTTCGCTGTCGTCGCCATGGAAGTGCGC
GAACTCGCCCAGCGCTCGTCGAGCGCGGCCAAGGAGATCTCCAGCCTGCTGCAGAAATCGACGCATGAGGTCGAAAGCGG
CGTGGGGCTTGTGGAAAGGGCTGGCGTAGCGCTGACCGGCATCGGCGCCCATGTCGAGGCAATCAACGGGCAGATCCACG
ACATCATGGGTGCGACCCGCGAAGAGGCCGATACGCTGCGGGAGATCAACAGCGCTGTGGCCGAACTCGACGCGATGACG
CAACAGAATGCCTCGATGGTCGAGGAGACGACGGCGGCGATCCACAGGCTGGCGACGGAAGCCCTGGAAATGGACCGCCA
GCTCGGAAATTTCACGCTGCCCCCTGGCCACCACCAGCCCAGCGCCGAGGTGCACGTGCTGCGCCGTCACCGGTAG

Upstream 100 bases:

>100_bases
AAGGAGATAAGCCCCCCGATGTTCTGTTTAAAGGATCGGTCGATCAGGCATGCGCTGCGTGCCCACGCCGGCAGGCGTGT
TCAGAAGGGGTTCGTCGTAC

Downstream 100 bases:

>100_bases
CCACTATCTGGCGGTATGGCAAAAGGGTCGCGCTGGCGCGGCCCTTTTTCTTTGCACGATCGGTTTGGAATGGTGCGGGT
GCGAACCTACATAGGCTGCA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 771; Mature: 770

Protein sequence:

>771_residues
MAQRFQSLSFKVIATFILLTVLSIAVIDVLAYFASSRISDEQALKAKESVLIFRGDMLQDQLTQLENQATSIARIEALQM
SITSLKSGWKTIEKTSGDARAELKKVFISGNPNPADQREKLMKPEGPSGFYYSNHEKTQGEVARDLADTAFSDLLIADLD
GTVLYSYKKQDDFAENLKTDAWKATGAGIAFAKAIENTAKATDDAAPTGFSGLRVDAASGNSAIFYAVPIVKLGAAKGII
LFKVRDDIVTGILAKGIVQGSTARAAIVSSDGSAIGLDANGRLATLDATPFTFIKDALASSAMTVADFDRVDGPARAYVR
GIDYRGDRFLVIESVLLSDLNAGSIEIATLLTMIGIGVLVVMAIATGLVTNFLFSPLARLAGVTRDVADGKLDSEIGSLN
RKDEIGTMANALARFRQSLIESRELEAASEETRLQAEQDRQQNLAEREAEAKTLQQVVEAIDEGLHHLASGDLAYQIDTR
FPNELESLRINFNEALATLSETMTAIGGNSMAVRAGSEEMRTGADELAGRTERQAGSITETANAISAITQSVRRQIERAE
QAERIARDAKKETTGSGQIMRETIAAMEAIQTSSRQINTIISVIDDIAFQTNLLALNAGVEAARAGESGKGFAVVAMEVR
ELAQRSSSAAKEISSLLQKSTHEVESGVGLVERAGVALTGIGAHVEAINGQIHDIMGATREEADTLREINSAVAELDAMT
QQNASMVEETTAAIHRLATEALEMDRQLGNFTLPPGHHQPSAEVHVLRRHR

Sequences:

>Translated_771_residues
MAQRFQSLSFKVIATFILLTVLSIAVIDVLAYFASSRISDEQALKAKESVLIFRGDMLQDQLTQLENQATSIARIEALQM
SITSLKSGWKTIEKTSGDARAELKKVFISGNPNPADQREKLMKPEGPSGFYYSNHEKTQGEVARDLADTAFSDLLIADLD
GTVLYSYKKQDDFAENLKTDAWKATGAGIAFAKAIENTAKATDDAAPTGFSGLRVDAASGNSAIFYAVPIVKLGAAKGII
LFKVRDDIVTGILAKGIVQGSTARAAIVSSDGSAIGLDANGRLATLDATPFTFIKDALASSAMTVADFDRVDGPARAYVR
GIDYRGDRFLVIESVLLSDLNAGSIEIATLLTMIGIGVLVVMAIATGLVTNFLFSPLARLAGVTRDVADGKLDSEIGSLN
RKDEIGTMANALARFRQSLIESRELEAASEETRLQAEQDRQQNLAEREAEAKTLQQVVEAIDEGLHHLASGDLAYQIDTR
FPNELESLRINFNEALATLSETMTAIGGNSMAVRAGSEEMRTGADELAGRTERQAGSITETANAISAITQSVRRQIERAE
QAERIARDAKKETTGSGQIMRETIAAMEAIQTSSRQINTIISVIDDIAFQTNLLALNAGVEAARAGESGKGFAVVAMEVR
ELAQRSSSAAKEISSLLQKSTHEVESGVGLVERAGVALTGIGAHVEAINGQIHDIMGATREEADTLREINSAVAELDAMT
QQNASMVEETTAAIHRLATEALEMDRQLGNFTLPPGHHQPSAEVHVLRRHR
>Mature_770_residues
AQRFQSLSFKVIATFILLTVLSIAVIDVLAYFASSRISDEQALKAKESVLIFRGDMLQDQLTQLENQATSIARIEALQMS
ITSLKSGWKTIEKTSGDARAELKKVFISGNPNPADQREKLMKPEGPSGFYYSNHEKTQGEVARDLADTAFSDLLIADLDG
TVLYSYKKQDDFAENLKTDAWKATGAGIAFAKAIENTAKATDDAAPTGFSGLRVDAASGNSAIFYAVPIVKLGAAKGIIL
FKVRDDIVTGILAKGIVQGSTARAAIVSSDGSAIGLDANGRLATLDATPFTFIKDALASSAMTVADFDRVDGPARAYVRG
IDYRGDRFLVIESVLLSDLNAGSIEIATLLTMIGIGVLVVMAIATGLVTNFLFSPLARLAGVTRDVADGKLDSEIGSLNR
KDEIGTMANALARFRQSLIESRELEAASEETRLQAEQDRQQNLAEREAEAKTLQQVVEAIDEGLHHLASGDLAYQIDTRF
PNELESLRINFNEALATLSETMTAIGGNSMAVRAGSEEMRTGADELAGRTERQAGSITETANAISAITQSVRRQIERAEQ
AERIARDAKKETTGSGQIMRETIAAMEAIQTSSRQINTIISVIDDIAFQTNLLALNAGVEAARAGESGKGFAVVAMEVRE
LAQRSSSAAKEISSLLQKSTHEVESGVGLVERAGVALTGIGAHVEAINGQIHDIMGATREEADTLREINSAVAELDAMTQ
QNASMVEETTAAIHRLATEALEMDRQLGNFTLPPGHHQPSAEVHVLRRHR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=326, Percent_Identity=38.0368098159509, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI2367378, Length=261, Percent_Identity=41.7624521072797, Blast_Score=182, Evalue=6e-47,
Organism=Escherichia coli, GI1788195, Length=267, Percent_Identity=41.1985018726592, Blast_Score=174, Evalue=2e-44,
Organism=Escherichia coli, GI1787690, Length=312, Percent_Identity=36.5384615384615, Blast_Score=173, Evalue=4e-44,
Organism=Escherichia coli, GI1789453, Length=219, Percent_Identity=42.9223744292237, Blast_Score=155, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 82716; Mature: 82585

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRFQSLSFKVIATFILLTVLSIAVIDVLAYFASSRISDEQALKAKESVLIFRGDMLQD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECHHHHH
QLTQLENQATSIARIEALQMSITSLKSGWKTIEKTSGDARAELKKVFISGNPNPADQREK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCHHHHHH
LMKPEGPSGFYYSNHEKTQGEVARDLADTAFSDLLIADLDGTVLYSYKKQDDFAENLKTD
HCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHHCCC
AWKATGAGIAFAKAIENTAKATDDAAPTGFSGLRVDAASGNSAIFYAVPIVKLGAAKGII
CHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEEHHHHHCCCCCEE
LFKVRDDIVTGILAKGIVQGSTARAAIVSSDGSAIGLDANGRLATLDATPFTFIKDALAS
EEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCEEEECCCCHHHHHHHHHH
SAMTVADFDRVDGPARAYVRGIDYRGDRFLVIESVLLSDLNAGSIEIATLLTMIGIGVLV
CCCCHHHHHHCCCHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VMAIATGLVTNFLFSPLARLAGVTRDVADGKLDSEIGSLNRKDEIGTMANALARFRQSLI
HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ESRELEAASEETRLQAEQDRQQNLAEREAEAKTLQQVVEAIDEGLHHLASGDLAYQIDTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
FPNELESLRINFNEALATLSETMTAIGGNSMAVRAGSEEMRTGADELAGRTERQAGSITE
CCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCHHHHCCCHHHHCCCHHH
TANAISAITQSVRRQIERAEQAERIARDAKKETTGSGQIMRETIAAMEAIQTSSRQINTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ISVIDDIAFQTNLLALNAGVEAARAGESGKGFAVVAMEVRELAQRSSSAAKEISSLLQKS
HHHHHHHHHHHCEEEEECCCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
THEVESGVGLVERAGVALTGIGAHVEAINGQIHDIMGATREEADTLREINSAVAELDAMT
HHHHHHCCCHHHHCCEEEEECCHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QQNASMVEETTAAIHRLATEALEMDRQLGNFTLPPGHHQPSAEVHVLRRHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
AQRFQSLSFKVIATFILLTVLSIAVIDVLAYFASSRISDEQALKAKESVLIFRGDMLQD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECHHHHH
QLTQLENQATSIARIEALQMSITSLKSGWKTIEKTSGDARAELKKVFISGNPNPADQREK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCHHHHHH
LMKPEGPSGFYYSNHEKTQGEVARDLADTAFSDLLIADLDGTVLYSYKKQDDFAENLKTD
HCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHHCCC
AWKATGAGIAFAKAIENTAKATDDAAPTGFSGLRVDAASGNSAIFYAVPIVKLGAAKGII
CHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEEHHHHHCCCCCEE
LFKVRDDIVTGILAKGIVQGSTARAAIVSSDGSAIGLDANGRLATLDATPFTFIKDALAS
EEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCEEEECCCCHHHHHHHHHH
SAMTVADFDRVDGPARAYVRGIDYRGDRFLVIESVLLSDLNAGSIEIATLLTMIGIGVLV
CCCCHHHHHHCCCHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VMAIATGLVTNFLFSPLARLAGVTRDVADGKLDSEIGSLNRKDEIGTMANALARFRQSLI
HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ESRELEAASEETRLQAEQDRQQNLAEREAEAKTLQQVVEAIDEGLHHLASGDLAYQIDTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
FPNELESLRINFNEALATLSETMTAIGGNSMAVRAGSEEMRTGADELAGRTERQAGSITE
CCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCHHHHCCCHHHHCCCHHH
TANAISAITQSVRRQIERAEQAERIARDAKKETTGSGQIMRETIAAMEAIQTSSRQINTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ISVIDDIAFQTNLLALNAGVEAARAGESGKGFAVVAMEVRELAQRSSSAAKEISSLLQKS
HHHHHHHHHHHCEEEEECCCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
THEVESGVGLVERAGVALTGIGAHVEAINGQIHDIMGATREEADTLREINSAVAELDAMT
HHHHHHCCCHHHHCCEEEEECCHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QQNASMVEETTAAIHRLATEALEMDRQLGNFTLPPGHHQPSAEVHVLRRHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]