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The map label for this gene is omp16 [H]

Identifier: 209550775

GI number: 209550775

Start: 3288822

End: 3289355

Strand: Reverse

Name: omp16 [H]

Synonym: Rleg2_3199

Alternate gene names: 209550775

Gene position: 3289355-3288822 (Counterclockwise)

Preceding gene: 209550776

Following gene: 209550774

Centisome position: 72.49

GC content: 65.92

Gene sequence:

>534_bases
ATGAGCCGAATTCATACCCCGGCAATGAGCCGCATGCAGAATTTCGCCCGCAACCCCGTCATGATCGCGCTTGTCGCCGG
CCTCGCGCTTGCGAGCTGCGCCAAGAAGAACGGCGGCATGCCGAATAGCGCCGGCGATATCGGCCTCGGCGGCGGTGCGG
CAACGCCGGGCTCGGCCCAGGACTTCACGGTCAATGTCGGCGACCGCATCTTCTTCGACACCGACTCCTCGTCGATCCGC
GCCGATGCTTCGCAGACGCTCGACCGTCAGGCTCAGTGGCTCGCCCGCTACCCGAACTACCAGATCACCGTCGAAGGCCA
TGCCGACGAACGCGGTACGCGCGAATACAACCTCGCGCTCGGTGCCCGCCGTGCGGCTGCCGCCAAGGATTATCTCGCTT
CGCGCGGGGTCCCGGCGCAGCGCCTGAAGACGATTTCCTACGGCAAGGAACGTCCGGTCGCCGTCTGCGACGATATTTCC
TGCTGGTCGCAGAACCGCCGCGCAGTCACGGTTCTCGGCGGCGCCGGCATGTAA

Upstream 100 bases:

>100_bases
AGGGACAAATCAGTAATTCGTTAACCATAATTTTTGAGGGGCGGTTAACCGAGTGCGGTTACTGTCCGGAAACCCTGATG
AACCCGCAAGGAGACCGGCC

Downstream 100 bases:

>100_bases
TCTGCCAATTTAGTTGGCTTTCGCAAGGCGGTCCTCTCGGGGGCCGCCTTTCTTTTTGACCACACTTTGGCCAGACTCCG
TTGCTTTTTGACAGCAATTG

Product: peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSRIHTPAMSRMQNFARNPVMIALVAGLALASCAKKNGGMPNSAGDIGLGGGAATPGSAQDFTVNVGDRIFFDTDSSSIR
ADASQTLDRQAQWLARYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLASRGVPAQRLKTISYGKERPVAVCDDIS
CWSQNRRAVTVLGGAGM

Sequences:

>Translated_177_residues
MSRIHTPAMSRMQNFARNPVMIALVAGLALASCAKKNGGMPNSAGDIGLGGGAATPGSAQDFTVNVGDRIFFDTDSSSIR
ADASQTLDRQAQWLARYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLASRGVPAQRLKTISYGKERPVAVCDDIS
CWSQNRRAVTVLGGAGM
>Mature_176_residues
SRIHTPAMSRMQNFARNPVMIALVAGLALASCAKKNGGMPNSAGDIGLGGGAATPGSAQDFTVNVGDRIFFDTDSSSIRA
DASQTLDRQAQWLARYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLASRGVPAQRLKTISYGKERPVAVCDDISC
WSQNRRAVTVLGGAGM

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=164, Percent_Identity=41.4634146341463, Blast_Score=122, Evalue=9e-30,
Organism=Escherichia coli, GI48994946, Length=123, Percent_Identity=28.4552845528455, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 18835; Mature: 18704

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIHTPAMSRMQNFARNPVMIALVAGLALASCAKKNGGMPNSAGDIGLGGGAATPGSAQ
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DFTVNVGDRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADERGTREYNLAL
EEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEHHH
GARRAAAAKDYLASRGVPAQRLKTISYGKERPVAVCDDISCWSQNRRAVTVLGGAGM
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCHHHCCCCEEEEEECCCCC
>Mature Secondary Structure 
SRIHTPAMSRMQNFARNPVMIALVAGLALASCAKKNGGMPNSAGDIGLGGGAATPGSAQ
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DFTVNVGDRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADERGTREYNLAL
EEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEHHH
GARRAAAAKDYLASRGVPAQRLKTISYGKERPVAVCDDISCWSQNRRAVTVLGGAGM
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]