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The map label for this gene is dksA [H]

Identifier: 209549558

GI number: 209549558

Start: 2012806

End: 2013225

Strand: Reverse

Name: dksA [H]

Synonym: Rleg2_1964

Alternate gene names: 209549558

Gene position: 2013225-2012806 (Counterclockwise)

Preceding gene: 209549563

Following gene: 209549555

Centisome position: 44.36

GC content: 58.33

Gene sequence:

>420_bases
TTGAGTGAGAAGATCGATCTTAGCAATTACGTTCCCTCGGAAGAGGAAGAGTTCATGAACGTAAACCAGCGTGCCTACTT
CAGGACCAAGCTGGTTGCATGGAGAAATGATATCCTTCGAGAAGCGCGCGAAACCCTCGACCACCTGGCCGAGGAAAGCG
CAAACCATCCCGACCTCGCCGACCGGGCGTCGTCGGAAACCGACCGGGCGATCGAACTTCGCGCCCGTGATCGGCAGAGA
AAGCTGATTTCCAAGATCGACGCGGCACTGCAGCGCATCGAAGACGGTACTTACGGCTATTGCGAGGAAACCGGCGAACC
GATCGGCCTCAAGCGTCTCGACGCCCGCCCGATCGCGACGCTGTCGATCGAGGCGCAGGAGCGCCACGAACGCCGCGAAA
AAGTCTATCGCGACGAATAA

Upstream 100 bases:

>100_bases
CAGATTTAAAAATCTGTTTACCTGTCGTATTTGGCTTGAATCGCGGCTAGCGCTTGGGATATACACCCGCCCAGATGAGA
TGTTCTTCAGGAGAATCGCG

Downstream 100 bases:

>100_bases
CGGTTTTCATGCAGAGATGAGAGCAGAACAAGCGCCGCGATCGGATAGCGGCGCTTGTTCGTTTATCACTGCTCCGCTGC
ACAAATGCCTGTCGCCAGAG

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSEKIDLSNYVPSEEEEFMNVNQRAYFRTKLVAWRNDILREARETLDHLAEESANHPDLADRASSETDRAIELRARDRQR
KLISKIDAALQRIEDGTYGYCEETGEPIGLKRLDARPIATLSIEAQERHERREKVYRDE

Sequences:

>Translated_139_residues
MSEKIDLSNYVPSEEEEFMNVNQRAYFRTKLVAWRNDILREARETLDHLAEESANHPDLADRASSETDRAIELRARDRQR
KLISKIDAALQRIEDGTYGYCEETGEPIGLKRLDARPIATLSIEAQERHERREKVYRDE
>Mature_138_residues
SEKIDLSNYVPSEEEEFMNVNQRAYFRTKLVAWRNDILREARETLDHLAEESANHPDLADRASSETDRAIELRARDRQRK
LISKIDAALQRIEDGTYGYCEETGEPIGLKRLDARPIATLSIEAQERHERREKVYRDE

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=119, Percent_Identity=49.5798319327731, Blast_Score=117, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16291; Mature: 16160

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKIDLSNYVPSEEEEFMNVNQRAYFRTKLVAWRNDILREARETLDHLAEESANHPDLA
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
DRASSETDRAIELRARDRQRKLISKIDAALQRIEDGTYGYCEETGEPIGLKRLDARPIAT
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCEE
LSIEAQERHERREKVYRDE
EECCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEKIDLSNYVPSEEEEFMNVNQRAYFRTKLVAWRNDILREARETLDHLAEESANHPDLA
CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
DRASSETDRAIELRARDRQRKLISKIDAALQRIEDGTYGYCEETGEPIGLKRLDARPIAT
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCEE
LSIEAQERHERREKVYRDE
EECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]