| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is zraS [C]
Identifier: 209549555
GI number: 209549555
Start: 2007704
End: 2010307
Strand: Reverse
Name: zraS [C]
Synonym: Rleg2_1961
Alternate gene names: 209549555
Gene position: 2010307-2007704 (Counterclockwise)
Preceding gene: 209549558
Following gene: 209549552
Centisome position: 44.3
GC content: 63.94
Gene sequence:
>2604_bases ATGACGAAACCGCGTCAGGCCGACGATTATAACGCACCGCTTGTGGATCGTGGGGGGCGTTCTGGCACGGTTTTGCGCAT TCTTCTGCTGGCCCTTGTGCTGATTGCAGCCGCCGGCGGCTTCGTCGTCTTCAAGAGATCGCTCGACAATGAGATCGTGC TCGGCGGTCTCGGCGTGCTTGCCATGGTCGGCATCTTCTTCTTGGTATCCTCGGTCATCGGCTTCATCGAGGTGATGCCG CAGCGCCAGTCCGACAGCCTGGCGCGCGCCTTCCTCAACAGCCATCCCGACGGCACGCTGATCACCGACGAAAAGGGCAG GATCATCTATGCCAATGCCGCCTATGGCGCGCTGACCGGCGCACGCAAGGCGACCGAGGTGCAGACGCTGGAAACCCTGC TGTCGCGCCACCGCGAATCGAACGAGGCGCTCTATCGACTGGTCAACGGCCTGCGCGAGGGCAAGGAAGGCCGGGAGGAA TTCCGCCTGTTGCGCGCCGTCGGGCCTGGCAGCAACAGCTCCGGCGCCCATTGGTATCGGCTGAAGGCGCGGCTGCTGCA GCCGGAGGAAAACGGCGGCAAGCCGCTGCAGATCTGGCAGATCACCGATATCACCACCGAGCGCGACGACCAGGAGCGCT TCTTCAAGGAATTGCAGAACGCGATCGACTATCTCGACCATGCGCCGGCCGGTTTCTTCTCCGCCGGCAGGAAGGGCGAG ATCTTCTATCTGAACGCCACGCTTGCCGAGTGGCTGGGCCTCGATCTCACCAAATTCGTGCCCGGCTCGATGACGATCGG CGACGTGGTGGCGGGTGAGGGGCTGGCGCTGATCCAGTCGGTGCAGGCCGAACCCGGCCTGAAGAAGACGGTGACGCTCG ATCTCGACCTGCGCAAGACCAACGGCCAGAGCCTGCCGGTGCAGATCATCCACAGCGTCACGTCGATGCGCGACGGCGCG CCTGGCGAGAGCCGGACGATCGTGCTGGGGCGTGAAAAGAGCGAGGCCGGCGGCCAGTCCGCTTCGGCCGCCGCCATGCG TTTCACCCGCTTCTTCAACAACACGCCGATGGCGATCGCCTCGGTGGATGGCGAAGGGCGGATCCTGCGGACCAACGCGC CGTTCCTGAAGCTGTTCTCCGGCGTCGTCTCGCGCGACGACCTCGAAAAGGCGCCGCATCTCGAAACCATCGTCCAGGAA AGCGACCGGCCGCAGCTCGCCGAGGCGCTGGCGGCGGCCAAGGACCGGCAAGGCGATATCGCGCCCCTCGATACCCGCAC GCCGACCGACGAGGCGCGCTATTTCCGCTTCTATGTCAATGCCGTCATCGACCAGAGCGACGAGGCGCCAGAAGAAGCGG CGATCGTCTATGCCGTCGAGGTGACCGAGCAGAAGGCGCTGGAAGCGCAGATGGCGCAGACGCAGAAGATGAATGCTGTC GGCACGCTTGCCGGCGGCATCGCGCATGATTTCAACAATGTGCTGACGGCGATCCTGCTTTCCTCCGACCATCTGCTGCT GCAGGCGCGGCCGGCCGATGCGAGCTTTGCCGACCTGATGGAAATCAAGCGCAACGCCAACCGCGCCGCGGTGCTGGTGC GCCAGCTGCTCGCATTCTCGCGCAAGCAGACGATGCGGCCTTCGGTGCTCAACCTCACCGATGTCGTCGGCGACCTGCGC ATGCTGGTCGACCGGCTGCTCTCCGGCACCAACGTCAAGCTCGACGTGCAATATGGCCGCGACCTCTGGCCCGTCAAAAC CGATCTTTCGCAATTCGAACAGGTGCTGATCAATCTCTGCGTCAATGCGCGCGATGCCATGCCCGAGGGTGGCACGCTGA CGCTGCGCACCCGAAACCTGACGGCTGCCGAGGTCTCCGCCTTCAACTATTCCTACATGCCGGCCGAAGACATGGTGCTG ATCGAAGTCGCCGATAACGGCACCGGTATCGCGCCGGAGATCATGGACAAGATCTTCGAGCCCTTCTTCACCACTAAGGA TGTCGGCAAGGGGACGGGACTTGGCCTCGCCATGGTCTACGGCATCGTCAAGCAATCGGGTGGTTACATCCAGCCGGAAT CCGAAGTCGGCAAGGGCACGACCTTCCGGGTCTTCCTGCCGCGCCACATCCCGGAGCCGGCGGTTGCCGCCGAAGCCGGT GCGATCGACAGCGCCGTCGCCGAGATCGGCCTGCGGCCGGAGGCGCCGACGGCGCAGCAGCCGGAAGACCTGACGGGATC GGCGGTCATTCTTCTCGTCGAAGACGAGGAGGCGGTGCGCCGCGGCGGCAAGCGCATGCTGGAAACGCGCGGTTATACCG TGCACGAGGCGGGCTCGGGCGTCGAGGCGCTCAGCATCATGGAAGAGCTCGACGGCAAGGTCGACATCGTCGTTTCCGAC GTGGTCATGCCTGAGATGGACGGCCCGACACTGCTGCGCGAGCTGCGCAAGACCTATCCCGACATGAAATTCATCTTCGT CTCCGGCTATGCCGAAGATGCCTTTGCCCGCAACCTGCCGCCCGAGTCAAAGTTCGGGTTTTTGCCGAAGCCGTTTTCGC TGAAGCAGTTGGCTGTGGTGGTCAAGGAGACGCTGGATAGTTAG
Upstream 100 bases:
>100_bases CGGTGTTTTTGCCGACGCGGCAAATTGCTAAGAAGGAAAGAGTGCCTGATTCCCGCTTCGTGTTCGTGCTACGAAGCTGG AGGGCTTATGTGAGGAATAC
Downstream 100 bases:
>100_bases CGGTTACGGTTTGGTCGATTTTGGATAGGGCGTCCGGTGGGGCACCCCCCTCTGTCCTGCCGGACATCTCCCCCACAAGG AGGGAGATTGACTCTCGGCT
Product: multi-sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 867; Mature: 866
Protein sequence:
>867_residues MTKPRQADDYNAPLVDRGGRSGTVLRILLLALVLIAAAGGFVVFKRSLDNEIVLGGLGVLAMVGIFFLVSSVIGFIEVMP QRQSDSLARAFLNSHPDGTLITDEKGRIIYANAAYGALTGARKATEVQTLETLLSRHRESNEALYRLVNGLREGKEGREE FRLLRAVGPGSNSSGAHWYRLKARLLQPEENGGKPLQIWQITDITTERDDQERFFKELQNAIDYLDHAPAGFFSAGRKGE IFYLNATLAEWLGLDLTKFVPGSMTIGDVVAGEGLALIQSVQAEPGLKKTVTLDLDLRKTNGQSLPVQIIHSVTSMRDGA PGESRTIVLGREKSEAGGQSASAAAMRFTRFFNNTPMAIASVDGEGRILRTNAPFLKLFSGVVSRDDLEKAPHLETIVQE SDRPQLAEALAAAKDRQGDIAPLDTRTPTDEARYFRFYVNAVIDQSDEAPEEAAIVYAVEVTEQKALEAQMAQTQKMNAV GTLAGGIAHDFNNVLTAILLSSDHLLLQARPADASFADLMEIKRNANRAAVLVRQLLAFSRKQTMRPSVLNLTDVVGDLR MLVDRLLSGTNVKLDVQYGRDLWPVKTDLSQFEQVLINLCVNARDAMPEGGTLTLRTRNLTAAEVSAFNYSYMPAEDMVL IEVADNGTGIAPEIMDKIFEPFFTTKDVGKGTGLGLAMVYGIVKQSGGYIQPESEVGKGTTFRVFLPRHIPEPAVAAEAG AIDSAVAEIGLRPEAPTAQQPEDLTGSAVILLVEDEEAVRRGGKRMLETRGYTVHEAGSGVEALSIMEELDGKVDIVVSD VVMPEMDGPTLLRELRKTYPDMKFIFVSGYAEDAFARNLPPESKFGFLPKPFSLKQLAVVVKETLDS
Sequences:
>Translated_867_residues MTKPRQADDYNAPLVDRGGRSGTVLRILLLALVLIAAAGGFVVFKRSLDNEIVLGGLGVLAMVGIFFLVSSVIGFIEVMP QRQSDSLARAFLNSHPDGTLITDEKGRIIYANAAYGALTGARKATEVQTLETLLSRHRESNEALYRLVNGLREGKEGREE FRLLRAVGPGSNSSGAHWYRLKARLLQPEENGGKPLQIWQITDITTERDDQERFFKELQNAIDYLDHAPAGFFSAGRKGE IFYLNATLAEWLGLDLTKFVPGSMTIGDVVAGEGLALIQSVQAEPGLKKTVTLDLDLRKTNGQSLPVQIIHSVTSMRDGA PGESRTIVLGREKSEAGGQSASAAAMRFTRFFNNTPMAIASVDGEGRILRTNAPFLKLFSGVVSRDDLEKAPHLETIVQE SDRPQLAEALAAAKDRQGDIAPLDTRTPTDEARYFRFYVNAVIDQSDEAPEEAAIVYAVEVTEQKALEAQMAQTQKMNAV GTLAGGIAHDFNNVLTAILLSSDHLLLQARPADASFADLMEIKRNANRAAVLVRQLLAFSRKQTMRPSVLNLTDVVGDLR MLVDRLLSGTNVKLDVQYGRDLWPVKTDLSQFEQVLINLCVNARDAMPEGGTLTLRTRNLTAAEVSAFNYSYMPAEDMVL IEVADNGTGIAPEIMDKIFEPFFTTKDVGKGTGLGLAMVYGIVKQSGGYIQPESEVGKGTTFRVFLPRHIPEPAVAAEAG AIDSAVAEIGLRPEAPTAQQPEDLTGSAVILLVEDEEAVRRGGKRMLETRGYTVHEAGSGVEALSIMEELDGKVDIVVSD VVMPEMDGPTLLRELRKTYPDMKFIFVSGYAEDAFARNLPPESKFGFLPKPFSLKQLAVVVKETLDS >Mature_866_residues TKPRQADDYNAPLVDRGGRSGTVLRILLLALVLIAAAGGFVVFKRSLDNEIVLGGLGVLAMVGIFFLVSSVIGFIEVMPQ RQSDSLARAFLNSHPDGTLITDEKGRIIYANAAYGALTGARKATEVQTLETLLSRHRESNEALYRLVNGLREGKEGREEF RLLRAVGPGSNSSGAHWYRLKARLLQPEENGGKPLQIWQITDITTERDDQERFFKELQNAIDYLDHAPAGFFSAGRKGEI FYLNATLAEWLGLDLTKFVPGSMTIGDVVAGEGLALIQSVQAEPGLKKTVTLDLDLRKTNGQSLPVQIIHSVTSMRDGAP GESRTIVLGREKSEAGGQSASAAAMRFTRFFNNTPMAIASVDGEGRILRTNAPFLKLFSGVVSRDDLEKAPHLETIVQES DRPQLAEALAAAKDRQGDIAPLDTRTPTDEARYFRFYVNAVIDQSDEAPEEAAIVYAVEVTEQKALEAQMAQTQKMNAVG TLAGGIAHDFNNVLTAILLSSDHLLLQARPADASFADLMEIKRNANRAAVLVRQLLAFSRKQTMRPSVLNLTDVVGDLRM LVDRLLSGTNVKLDVQYGRDLWPVKTDLSQFEQVLINLCVNARDAMPEGGTLTLRTRNLTAAEVSAFNYSYMPAEDMVLI EVADNGTGIAPEIMDKIFEPFFTTKDVGKGTGLGLAMVYGIVKQSGGYIQPESEVGKGTTFRVFLPRHIPEPAVAAEAGA IDSAVAEIGLRPEAPTAQQPEDLTGSAVILLVEDEEAVRRGGKRMLETRGYTVHEAGSGVEALSIMEELDGKVDIVVSDV VMPEMDGPTLLRELRKTYPDMKFIFVSGYAEDAFARNLPPESKFGFLPKPFSLKQLAVVVKETLDS
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=255, Percent_Identity=32.156862745098, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI1788549, Length=257, Percent_Identity=29.9610894941634, Blast_Score=103, Evalue=6e-23, Organism=Escherichia coli, GI48994928, Length=242, Percent_Identity=34.297520661157, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI87081816, Length=264, Percent_Identity=28.4090909090909, Blast_Score=88, Evalue=3e-18, Organism=Escherichia coli, GI1790300, Length=265, Percent_Identity=30.5660377358491, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1788713, Length=236, Percent_Identity=30.0847457627119, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788550, Length=122, Percent_Identity=32.7868852459016, Blast_Score=67, Evalue=7e-12, Organism=Escherichia coli, GI1790346, Length=254, Percent_Identity=26.3779527559055, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1786783, Length=235, Percent_Identity=25.531914893617, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 94486; Mature: 94355
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPRQADDYNAPLVDRGGRSGTVLRILLLALVLIAAAGGFVVFKRSLDNEIVLGGLGVL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECHHHHH AMVGIFFLVSSVIGFIEVMPQRQSDSLARAFLNSHPDGTLITDEKGRIIYANAAYGALTG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEECCHHHHHC ARKATEVQTLETLLSRHRESNEALYRLVNGLREGKEGREEFRLLRAVGPGSNSSGAHWYR CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEE LKARLLQPEENGGKPLQIWQITDITTERDDQERFFKELQNAIDYLDHAPAGFFSAGRKGE EEHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC IFYLNATLAEWLGLDLTKFVPGSMTIGDVVAGEGLALIQSVQAEPGLKKTVTLDLDLRKT EEEEECHHHHHHCCCHHHHCCCCCEEHHHHCCCCHHHHHHHHCCCCCCEEEEEEEEEECC NGQSLPVQIIHSVTSMRDGAPGESRTIVLGREKSEAGGQSASAAAMRFTRFFNNTPMAIA CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEE SVDGEGRILRTNAPFLKLFSGVVSRDDLEKAPHLETIVQESDRPQLAEALAAAKDRQGDI EECCCCEEEECCCCHHHHHHHHHCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCC APLDTRTPTDEARYFRFYVNAVIDQSDEAPEEAAIVYAVEVTEQKALEAQMAQTQKMNAV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHH GTLAGGIAHDFNNVLTAILLSSDHLLLQARPADASFADLMEIKRNANRAAVLVRQLLAFS HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH RKQTMRPSVLNLTDVVGDLRMLVDRLLSGTNVKLDVQYGRDLWPVKTDLSQFEQVLINLC HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH VNARDAMPEGGTLTLRTRNLTAAEVSAFNYSYMPAEDMVLIEVADNGTGIAPEIMDKIFE HCHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH PFFTTKDVGKGTGLGLAMVYGIVKQSGGYIQPESEVGKGTTFRVFLPRHIPEPAVAAEAG HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEECCCCCCCHHHHHCC AIDSAVAEIGLRPEAPTAQQPEDLTGSAVILLVEDEEAVRRGGKRMLETRGYTVHEAGSG CHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHCHHHHHHHCCCEEECCCCC VEALSIMEELDGKVDIVVSDVVMPEMDGPTLLRELRKTYPDMKFIFVSGYAEDAFARNLP HHHHHHHHHHCCCEEEEEECEECCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHCCCC PESKFGFLPKPFSLKQLAVVVKETLDS CCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TKPRQADDYNAPLVDRGGRSGTVLRILLLALVLIAAAGGFVVFKRSLDNEIVLGGLGVL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECHHHHH AMVGIFFLVSSVIGFIEVMPQRQSDSLARAFLNSHPDGTLITDEKGRIIYANAAYGALTG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEECCHHHHHC ARKATEVQTLETLLSRHRESNEALYRLVNGLREGKEGREEFRLLRAVGPGSNSSGAHWYR CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEE LKARLLQPEENGGKPLQIWQITDITTERDDQERFFKELQNAIDYLDHAPAGFFSAGRKGE EEHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC IFYLNATLAEWLGLDLTKFVPGSMTIGDVVAGEGLALIQSVQAEPGLKKTVTLDLDLRKT EEEEECHHHHHHCCCHHHHCCCCCEEHHHHCCCCHHHHHHHHCCCCCCEEEEEEEEEECC NGQSLPVQIIHSVTSMRDGAPGESRTIVLGREKSEAGGQSASAAAMRFTRFFNNTPMAIA CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEE SVDGEGRILRTNAPFLKLFSGVVSRDDLEKAPHLETIVQESDRPQLAEALAAAKDRQGDI EECCCCEEEECCCCHHHHHHHHHCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCC APLDTRTPTDEARYFRFYVNAVIDQSDEAPEEAAIVYAVEVTEQKALEAQMAQTQKMNAV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHH GTLAGGIAHDFNNVLTAILLSSDHLLLQARPADASFADLMEIKRNANRAAVLVRQLLAFS HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH RKQTMRPSVLNLTDVVGDLRMLVDRLLSGTNVKLDVQYGRDLWPVKTDLSQFEQVLINLC HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH VNARDAMPEGGTLTLRTRNLTAAEVSAFNYSYMPAEDMVLIEVADNGTGIAPEIMDKIFE HCHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH PFFTTKDVGKGTGLGLAMVYGIVKQSGGYIQPESEVGKGTTFRVFLPRHIPEPAVAAEAG HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEECCCCCCCHHHHHCC AIDSAVAEIGLRPEAPTAQQPEDLTGSAVILLVEDEEAVRRGGKRMLETRGYTVHEAGSG CHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHCHHHHHHHCCCEEECCCCC VEALSIMEELDGKVDIVVSDVVMPEMDGPTLLRELRKTYPDMKFIFVSGYAEDAFARNLP HHHHHHHHHHCCCEEEEEECEECCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHCCCC PESKFGFLPKPFSLKQLAVVVKETLDS CCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA