| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yciQ [H]
Identifier: 209548140
GI number: 209548140
Start: 547623
End: 549557
Strand: Direct
Name: yciQ [H]
Synonym: Rleg2_0534
Alternate gene names: 209548140
Gene position: 547623-549557 (Clockwise)
Preceding gene: 209548139
Following gene: 209548141
Centisome position: 12.07
GC content: 63.46
Gene sequence:
>1935_bases ATGGGACGTCGGTTTTTCGGATTTTGTTTGGCTCTGCTCTTGATGCTGGCCGCCTCGGCGGCCTTCGCCGCCGAGGTCAT CGACAATTTTGCCTCCGCCATCCAGCTGGAAAAGAGCGGCGCGATGACGGTGGCGGAGACGATCACCGTCAATGCCGAGG GCAACCGGATCAATCACGGCATTTTCCGTGACTTCCCGCTCTATTTCACCGATGCCGAAGGCCGTCGCCGCAGCGTCGAT TTCGACATGGTGTCGGTCACCCGCGACGGCGAGGACGAGCCATGGCACACGGAATCGATTTCCGGCGGCATCCGCATCTA TGCCGGTTCCGCCGATGTGTCGGTGACGCCGGGCCGTCACCGCTACGTCTTCACCTACAAGACCAACCGGCAGATCCGCT ATTTCGACGATCATGACGAACTCTACTGGAACGTCACCGGCAATGGCTGGATCTTCCCGATCCGCTCGGCGACGGCAACG GTGACGCTGCCACCGGGTGTCACCGCCACCGAGACGACGTTTTTCACCGGCCCGCAGGGTGCGACGGGAAAGAACGCCCG CGTCAGCGAGACAGGGGCCGGCCTTGTCTTCGCCACCACTGCGCCGCTCGATGCCAACGAAGGGCTGACTTTCGCAGTCC GCATGCCGAAGGGGTCGATCGATCCGCCGAGCGCGGATATGGAAAGCACATGGTGGCTCAAGGACAACCGCAATTATTTC ATCGGCTTCGGCGGCTTGATCCTGGTTTTCGCTTATTATCTCAGATCATGGCTGAAGGTCGGCCGCGATCCCGCCCGCGG CGTCGTCGTGCCGCGCTGGGACGCGCCTGACGGCATCTCGCCGGCGCTGGTCAACTACATCGACAATAAGGGATTTTCCG GCGGGGGTTGGACGGCGCTGGCTTCAACCGCGCTCAATCTTGCGGTGCGCGGTTACGTCAAGCTCGAAGACCTGAAGAAT TCGATCGTCATCCGCGGCACCGGCAAACCGCTCGGCAAGGAGAAATTCCAGGCCGGCGAGGCCGAATTGCTGAGGGTCGC CGGCGGCGCCGGCGCGACGCTGACGATCGACAAGGCCAATGGCGAGCGGGTGAAGTCCGTCGGCCAGAGCTTCCGGTCGG CGATCGAGAAAGAGCATCGCGGCAAATATTACAATTCCAACATCGGCTACACCACCGGCGGCATCGCGCTCAGCGCCGCC GCCTTGGTGGCGCTGTTCGTTTTCGGCTCGCTGCAGCCGGACACGATCGCGCTGATGCTGGTCCCGACGGCGATCTCGGT TTTCGTTGCCGTCTTCGTCGCCGGTTTCATGAGGTCGATGCATCGCGGCAACTCGCTGTTCGGCAAGATCGTCGCCATTA TCGCCACGGCGGTCGGCGTTTTCGTCGGCATCAGCATTCTTGCCGTCGTCGTCCTGGCGCTTGCTTCGTCGCTGGTGCAG CTGCACGAAACGCCGATGCTCTTTGCCGTCGGCGGCATCGTGCTGCTCAACATCCTCTATTTCTTCATCATGGGTGCGCC GACCCCGCTTGGCGCCCGGATGATGGACGGCATAGACGGCCTGCGCCAATATCTGACGCTGGCCGAAAAAGACCGGATGA ACACGGCGGGCGCGCCTGAAATGTCGCCGCAGCATTTCGAGACGCTGCTGCCCTACGCCGTGGCGCTCGGTGTCGAGAAA CCCTGGTCGCGCGCCTTCGAGACCTGGCTCGCAGCAGCCGCGGCCGGCGCGGCCGCCGCCTATGCGCCCACCTGGTATTC CGGCAATTTCAACAGCGGCAGTTTCTCCGACCGTGTCGGCGGCTTTTCCTCGTCGATGGCTTCGACTATCGCCTCGACCA TACCCTCGCCGCCGCCGTCGAGCTCGTCCTCCGGTTTTTCCGGCGGTGGTTCGTCCGGCGGCGGTGGCGGAGGCGGGGGA GGCGGGGGCTGGTAA
Upstream 100 bases:
>100_bases GACCTTCCCCGCCTATTGGCGGACGCTCGCCGCCCTCGGCGTGACATATCAAGACAAGGATTGAGGAGAAGCAGCCGAGG CTGCCGGCGGGGAGACAGGG
Downstream 100 bases:
>100_bases GCTTTCCCGCTTGACCTTTCGCCCCTTGGCCCTTAACCGCCAGAGGCAAAAGGAAAGGGTGGCGCATGAAGGTTCTGTTG ATCGGATCGGGCGGACGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MGRRFFGFCLALLLMLAASAAFAAEVIDNFASAIQLEKSGAMTVAETITVNAEGNRINHGIFRDFPLYFTDAEGRRRSVD FDMVSVTRDGEDEPWHTESISGGIRIYAGSADVSVTPGRHRYVFTYKTNRQIRYFDDHDELYWNVTGNGWIFPIRSATAT VTLPPGVTATETTFFTGPQGATGKNARVSETGAGLVFATTAPLDANEGLTFAVRMPKGSIDPPSADMESTWWLKDNRNYF IGFGGLILVFAYYLRSWLKVGRDPARGVVVPRWDAPDGISPALVNYIDNKGFSGGGWTALASTALNLAVRGYVKLEDLKN SIVIRGTGKPLGKEKFQAGEAELLRVAGGAGATLTIDKANGERVKSVGQSFRSAIEKEHRGKYYNSNIGYTTGGIALSAA ALVALFVFGSLQPDTIALMLVPTAISVFVAVFVAGFMRSMHRGNSLFGKIVAIIATAVGVFVGISILAVVVLALASSLVQ LHETPMLFAVGGIVLLNILYFFIMGAPTPLGARMMDGIDGLRQYLTLAEKDRMNTAGAPEMSPQHFETLLPYAVALGVEK PWSRAFETWLAAAAAGAAAAYAPTWYSGNFNSGSFSDRVGGFSSSMASTIASTIPSPPPSSSSSGFSGGGSSGGGGGGGG GGGW
Sequences:
>Translated_644_residues MGRRFFGFCLALLLMLAASAAFAAEVIDNFASAIQLEKSGAMTVAETITVNAEGNRINHGIFRDFPLYFTDAEGRRRSVD FDMVSVTRDGEDEPWHTESISGGIRIYAGSADVSVTPGRHRYVFTYKTNRQIRYFDDHDELYWNVTGNGWIFPIRSATAT VTLPPGVTATETTFFTGPQGATGKNARVSETGAGLVFATTAPLDANEGLTFAVRMPKGSIDPPSADMESTWWLKDNRNYF IGFGGLILVFAYYLRSWLKVGRDPARGVVVPRWDAPDGISPALVNYIDNKGFSGGGWTALASTALNLAVRGYVKLEDLKN SIVIRGTGKPLGKEKFQAGEAELLRVAGGAGATLTIDKANGERVKSVGQSFRSAIEKEHRGKYYNSNIGYTTGGIALSAA ALVALFVFGSLQPDTIALMLVPTAISVFVAVFVAGFMRSMHRGNSLFGKIVAIIATAVGVFVGISILAVVVLALASSLVQ LHETPMLFAVGGIVLLNILYFFIMGAPTPLGARMMDGIDGLRQYLTLAEKDRMNTAGAPEMSPQHFETLLPYAVALGVEK PWSRAFETWLAAAAAGAAAAYAPTWYSGNFNSGSFSDRVGGFSSSMASTIASTIPSPPPSSSSSGFSGGGSSGGGGGGGG GGGW >Mature_643_residues GRRFFGFCLALLLMLAASAAFAAEVIDNFASAIQLEKSGAMTVAETITVNAEGNRINHGIFRDFPLYFTDAEGRRRSVDF DMVSVTRDGEDEPWHTESISGGIRIYAGSADVSVTPGRHRYVFTYKTNRQIRYFDDHDELYWNVTGNGWIFPIRSATATV TLPPGVTATETTFFTGPQGATGKNARVSETGAGLVFATTAPLDANEGLTFAVRMPKGSIDPPSADMESTWWLKDNRNYFI GFGGLILVFAYYLRSWLKVGRDPARGVVVPRWDAPDGISPALVNYIDNKGFSGGGWTALASTALNLAVRGYVKLEDLKNS IVIRGTGKPLGKEKFQAGEAELLRVAGGAGATLTIDKANGERVKSVGQSFRSAIEKEHRGKYYNSNIGYTTGGIALSAAA LVALFVFGSLQPDTIALMLVPTAISVFVAVFVAGFMRSMHRGNSLFGKIVAIIATAVGVFVGISILAVVVLALASSLVQL HETPMLFAVGGIVLLNILYFFIMGAPTPLGARMMDGIDGLRQYLTLAEKDRMNTAGAPEMSPQHFETLLPYAVALGVEKP WSRAFETWLAAAAAGAAAAYAPTWYSGNFNSGSFSDRVGGFSSSMASTIASTIPSPPPSSSSSGFSGGGSSGGGGGGGGG GGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787522, Length=430, Percent_Identity=24.6511627906977, Blast_Score=106, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018702 [H]
Pfam domain/function: PF09972 DUF2207 [H]
EC number: NA
Molecular weight: Translated: 68191; Mature: 68060
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRFFGFCLALLLMLAASAAFAAEVIDNFASAIQLEKSGAMTVAETITVNAEGNRINHG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEECCCCEECCC IFRDFPLYFTDAEGRRRSVDFDMVSVTRDGEDEPWHTESISGGIRIYAGSADVSVTPGRH CCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEECCCCE RYVFTYKTNRQIRYFDDHDELYWNVTGNGWIFPIRSATATVTLPPGVTATETTFFTGPQG EEEEEEECCCEEEEEECCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCCEEEEECCCC ATGKNARVSETGAGLVFATTAPLDANEGLTFAVRMPKGSIDPPSADMESTWWLKDNRNYF CCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEE IGFGGLILVFAYYLRSWLKVGRDPARGVVVPRWDAPDGISPALVNYIDNKGFSGGGWTAL EECHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHH ASTALNLAVRGYVKLEDLKNSIVIRGTGKPLGKEKFQAGEAELLRVAGGAGATLTIDKAN HHHHHHHHHCCEEEEEECCCCEEEEECCCCCCHHHHCCCCHHEEEEECCCCCEEEEECCC GERVKSVGQSFRSAIEKEHRGKYYNSNIGYTTGGIALSAAALVALFVFGSLQPDTIALML CHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE VPTAISVFVAVFVAGFMRSMHRGNSLFGKIVAIIATAVGVFVGISILAVVVLALASSLVQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHETPMLFAVGGIVLLNILYFFIMGAPTPLGARMMDGIDGLRQYLTLAEKDRMNTAGAPE HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC MSPQHFETLLPYAVALGVEKPWSRAFETWLAAAAAGAAAAYAPTWYSGNFNSGSFSDRVG CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCEECCCCCCCCCHHHCC GFSSSMASTIASTIPSPPPSSSSSGFSGGGSSGGGGGGGGGGGW CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GRRFFGFCLALLLMLAASAAFAAEVIDNFASAIQLEKSGAMTVAETITVNAEGNRINHG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEECCCCEECCC IFRDFPLYFTDAEGRRRSVDFDMVSVTRDGEDEPWHTESISGGIRIYAGSADVSVTPGRH CCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEECCCCE RYVFTYKTNRQIRYFDDHDELYWNVTGNGWIFPIRSATATVTLPPGVTATETTFFTGPQG EEEEEEECCCEEEEEECCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCCEEEEECCCC ATGKNARVSETGAGLVFATTAPLDANEGLTFAVRMPKGSIDPPSADMESTWWLKDNRNYF CCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEE IGFGGLILVFAYYLRSWLKVGRDPARGVVVPRWDAPDGISPALVNYIDNKGFSGGGWTAL EECHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHH ASTALNLAVRGYVKLEDLKNSIVIRGTGKPLGKEKFQAGEAELLRVAGGAGATLTIDKAN HHHHHHHHHCCEEEEEECCCCEEEEECCCCCCHHHHCCCCHHEEEEECCCCCEEEEECCC GERVKSVGQSFRSAIEKEHRGKYYNSNIGYTTGGIALSAAALVALFVFGSLQPDTIALML CHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE VPTAISVFVAVFVAGFMRSMHRGNSLFGKIVAIIATAVGVFVGISILAVVVLALASSLVQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHETPMLFAVGGIVLLNILYFFIMGAPTPLGARMMDGIDGLRQYLTLAEKDRMNTAGAPE HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC MSPQHFETLLPYAVALGVEKPWSRAFETWLAAAAAGAAAAYAPTWYSGNFNSGSFSDRVG CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCEECCCCCCCCCHHHCC GFSSSMASTIASTIPSPPPSSSSSGFSGGGSSGGGGGGGGGGGW CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]