| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209547915
Identifier: 209547915
GI number: 209547915
Start: 313365
End: 314111
Strand: Direct
Name: 209547915
Synonym: Rleg2_0307
Alternate gene names: NA
Gene position: 313365-314111 (Clockwise)
Preceding gene: 209547914
Following gene: 209547922
Centisome position: 6.91
GC content: 61.98
Gene sequence:
>747_bases ATGGCGCATCCATCAGCCAGGACGATGAGCAGTGCCGAGCAGTCGCGCATGGTGCGTGTGAACAGGATTTCCAGCCGGTC CGATCTTTTTCCGCGGCTGATTGCCATGCAGAAACTCGCCGATGCTCACGGCTTCGCGATCTTCCGCGTCAGCGGCTCGG GTATTCCGGCAAAGCAGCGCCTTGTCTGCGAACTCGAAAACTGGGGGTCTTCCAATGCCGGTTTCGGCAAGGCCTTCACG GATGCCTACGGCGATGCCCTTCTCGAGCATATTGAAAAGTCGTTGTTGCCGCTCTCATGGGCCGGCGGTTGCGACCGTGC CGCCCCCGGTCCTGCCGACTTCGCGCCGTTCATGACGCGGCTGCAAGATGGGATCGTGCCTTTTTCCGGCCTTGCCTTTC CGGTGCGGCTCGGCGCCGTCGGCAACGGTTTCATCGTTTTCACCGGCGATGAGATCGATCCCTCGAGCGATACCATCGTC GAGCTGCACGGTCGCTGCTGCCATATCATGATGGATCTGCTCTCGCTCGACGAACGCCGCACGGCCGCCGCCGAAGCCCT CAGCGAACGCGAGATCGCCTGTCTCCAGCTTGCCGGCGACGGCCGCATCAGCGAAGAGATTGCCGACAAGCTCGGCCTAT CGGTGCACACCGTCAACGCCTATCTCGGCTCGGCGACGATCAAGCTCGATTCCGTCAATCGCATCCAGGCGATCGCCAAG GCGATCCGGCTCGGCTATATCAGCTGA
Upstream 100 bases:
>100_bases TCAACAACTACATTACCAGCGTGATGCGCAAGACGGCGACCAAGACCCGCTCCGAGGCCATAGCCTTCGCCGTCCGCAAT AATCTCGTATAGGGGGATCC
Downstream 100 bases:
>100_bases GCCCCGCTCAGCTGAGCGCATGAACGCTCTCATGTCTTGATAAGAGGTCAGCTGGCCAGCGCCCGCGGCGCCTGGCTGAC GCTGTAGCGCGATTCTCGAA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator Protein; Regulatory Protein LuxR; Transcriptional Regulator LuxR Family; Transcription Regulator Protein; LuxR/GerE Family Transcriptional Regulator; Transcriptional Regulator Protein LuxR Family; Transcriptional Regulator; Response Regulator Receiver Protein
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MAHPSARTMSSAEQSRMVRVNRISSRSDLFPRLIAMQKLADAHGFAIFRVSGSGIPAKQRLVCELENWGSSNAGFGKAFT DAYGDALLEHIEKSLLPLSWAGGCDRAAPGPADFAPFMTRLQDGIVPFSGLAFPVRLGAVGNGFIVFTGDEIDPSSDTIV ELHGRCCHIMMDLLSLDERRTAAAEALSEREIACLQLAGDGRISEEIADKLGLSVHTVNAYLGSATIKLDSVNRIQAIAK AIRLGYIS
Sequences:
>Translated_248_residues MAHPSARTMSSAEQSRMVRVNRISSRSDLFPRLIAMQKLADAHGFAIFRVSGSGIPAKQRLVCELENWGSSNAGFGKAFT DAYGDALLEHIEKSLLPLSWAGGCDRAAPGPADFAPFMTRLQDGIVPFSGLAFPVRLGAVGNGFIVFTGDEIDPSSDTIV ELHGRCCHIMMDLLSLDERRTAAAEALSEREIACLQLAGDGRISEEIADKLGLSVHTVNAYLGSATIKLDSVNRIQAIAK AIRLGYIS >Mature_247_residues AHPSARTMSSAEQSRMVRVNRISSRSDLFPRLIAMQKLADAHGFAIFRVSGSGIPAKQRLVCELENWGSSNAGFGKAFTD AYGDALLEHIEKSLLPLSWAGGCDRAAPGPADFAPFMTRLQDGIVPFSGLAFPVRLGAVGNGFIVFTGDEIDPSSDTIVE LHGRCCHIMMDLLSLDERRTAAAEALSEREIACLQLAGDGRISEEIADKLGLSVHTVNAYLGSATIKLDSVNRIQAIAKA IRLGYIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26620; Mature: 26489
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPSARTMSSAEQSRMVRVNRISSRSDLFPRLIAMQKLADAHGFAIFRVSGSGIPAKQR CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH LVCELENWGSSNAGFGKAFTDAYGDALLEHIEKSLLPLSWAGGCDRAAPGPADFAPFMTR HEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH LQDGIVPFSGLAFPVRLGAVGNGFIVFTGDEIDPSSDTIVELHGRCCHIMMDLLSLDERR HHHCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHH TAAAEALSEREIACLQLAGDGRISEEIADKLGLSVHTVNAYLGSATIKLDSVNRIQAIAK HHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCEEEEEEHHHCCEEEEECCHHHHHHHHH AIRLGYIS HHHHCCCC >Mature Secondary Structure AHPSARTMSSAEQSRMVRVNRISSRSDLFPRLIAMQKLADAHGFAIFRVSGSGIPAKQR CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH LVCELENWGSSNAGFGKAFTDAYGDALLEHIEKSLLPLSWAGGCDRAAPGPADFAPFMTR HEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH LQDGIVPFSGLAFPVRLGAVGNGFIVFTGDEIDPSSDTIVELHGRCCHIMMDLLSLDERR HHHCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHH TAAAEALSEREIACLQLAGDGRISEEIADKLGLSVHTVNAYLGSATIKLDSVNRIQAIAK HHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCEEEEEEHHHCCEEEEECCHHHHHHHHH AIRLGYIS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA