Click here to switch to the map view.

The map label for this gene is flgF [H]

Identifier: 209547922

GI number: 209547922

Start: 319721

End: 320455

Strand: Direct

Name: flgF [H]

Synonym: Rleg2_0314

Alternate gene names: 209547922

Gene position: 319721-320455 (Clockwise)

Preceding gene: 209547915

Following gene: 209547923

Centisome position: 7.05

GC content: 60.14

Gene sequence:

>735_bases
ATGCAATCCGGTCTTTATGTTTCTCTGTCGTCGCAGATGGCTCTCGAAAAGCGCCTGAACACCATCGCAGACAACATGGC
GAACGTGAACACGACCGGTTTTCGCGCCACCGAGGTGAAGTTCGACGAGATGGTGGCGGCGACCAAGAACAAGCTGAACA
CCAAGGTCGCCTTCGTTTCCCAGGGCAATGACTATCTGAACGAGTCAAACGGCGAGCTGCAGCACACCGGCAACATGCTT
GATTTCGCCATCAAGGGCGATGCGTGGTTCTCGCTCGATACGCCCGCCGGCCGGGTGCTGACGAGGGACGGCCGCTTCAC
CCTCAAGGATACCGGCGAACTGGTCTCGATCCGCGGATATCCCGTTCTCGACGCCGGCGGCGCGCCGATCCAGCTCAACT
CCAAAGGTGGCGAGCCGGCCGTCGGCACCGACGGCATCATCTATCAGGGTGACCGCCAGGTCGGTTCACTCGGCCTGTTC
GAGGCCGATATCAGCAAGGGTTACCTGCGCTACGAAAACAGCGGCATCATGACCACCGACCAGCCGCGCGCCGTCGTCGA
CCGCTTCAATGTCGGTGTCGAGCAGGGTTATCTCGAAAACTCCAACGTCAACGCCATGCGCGAGATCACCCAGCTGATCG
AAGTCAACCGCGCCTTCGAAAGCGTCTCGTCGCTGATGCGCGACAGCGAGGATTCCTTCAAGGAAGCCGTCCAGACGCTT
GGAGGTAGCCGCTAA

Upstream 100 bases:

>100_bases
CCGTTTCTGAGATGCCGCCTCAGCGAAATCCCGGCCGAACCTCATAAGACGACGCCCGGCTTTTCGTTCCGTTCATCGCC
AATGCTTGGAGCCTACCGAC

Downstream 100 bases:

>100_bases
TGCATGTCGCCCAAAAGTGTGCAGCGGTTTTGGGAGGACGACATGCATAAGAACAGAGACCGAAAATGCGTCGCATTTTC
GGGTGGGATTGAAGAATGAG

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVSQGNDYLNESNGELQHTGNML
DFAIKGDAWFSLDTPAGRVLTRDGRFTLKDTGELVSIRGYPVLDAGGAPIQLNSKGGEPAVGTDGIIYQGDRQVGSLGLF
EADISKGYLRYENSGIMTTDQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQTL
GGSR

Sequences:

>Translated_244_residues
MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVSQGNDYLNESNGELQHTGNML
DFAIKGDAWFSLDTPAGRVLTRDGRFTLKDTGELVSIRGYPVLDAGGAPIQLNSKGGEPAVGTDGIIYQGDRQVGSLGLF
EADISKGYLRYENSGIMTTDQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQTL
GGSR
>Mature_244_residues
MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVSQGNDYLNESNGELQHTGNML
DFAIKGDAWFSLDTPAGRVLTRDGRFTLKDTGELVSIRGYPVLDAGGAPIQLNSKGGEPAVGTDGIIYQGDRQVGSLGLF
EADISKGYLRYENSGIMTTDQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQTL
GGSR

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=267, Percent_Identity=27.7153558052434, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26585; Mature: 26585

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS
CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEEEE
QGNDYLNESNGELQHTGNMLDFAIKGDAWFSLDTPAGRVLTRDGRFTLKDTGELVSIRGY
CCCHHHCCCCCCEEECCCEEEEEEECCEEEEECCCCCEEEEECCCEEEECCCCEEEECCC
PVLDAGGAPIQLNSKGGEPAVGTDGIIYQGDRQVGSLGLFEADISKGYLRYENSGIMTTD
EEEECCCCEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEHHCCCCEEEECCCCCEECC
QPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQTL
CCHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GGSR
CCCC
>Mature Secondary Structure
MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS
CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEEEE
QGNDYLNESNGELQHTGNMLDFAIKGDAWFSLDTPAGRVLTRDGRFTLKDTGELVSIRGY
CCCHHHCCCCCCEEECCCEEEEEEECCEEEEECCCCCEEEEECCCEEEECCCCEEEECCC
PVLDAGGAPIQLNSKGGEPAVGTDGIIYQGDRQVGSLGLFEADISKGYLRYENSGIMTTD
EEEECCCCEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEHHCCCCEEEECCCCCEECC
QPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQTL
CCHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GGSR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9858749; 11481430 [H]