Click here to switch to the map view.

The map label for this gene is slyA [C]

Identifier: 209547769

GI number: 209547769

Start: 155475

End: 155933

Strand: Reverse

Name: slyA [C]

Synonym: Rleg2_0158

Alternate gene names: 209547769

Gene position: 155933-155475 (Counterclockwise)

Preceding gene: 209547770

Following gene: 209547765

Centisome position: 3.44

GC content: 66.23

Gene sequence:

>459_bases
ATGGGCGAAGACGTGCTGTCAACACCGGGGCATCTCATCAGTCTTGCGGCGCGGGGCTTTGCTCGGCTCAGCGAGATGCG
CCTCAAACCGCTCGGCTTCGGTGTCGGCCAGTTGCCGGTGCTGGTGGCGCTGGGAGATCGCAAGGCAAGCACGCAGCGCG
ACCTCGCCCGCTTTGCCAGGGTGGAGCAGCCGCCGATGGCGCAGATGCTCGCCCGCATGGAGCGGGACGGCTTGATCGAG
CGGACAAGAGACCCCGCCGACGGGCGCAGCAGCCACATCGTGCTGACGAAAGCGGCCCGGGAAGCCATGCCGGCAGCCAT
TGCGGCCTTGTTCCAGGGAAACAGCGAGGCATTGGCGGGGTTTACGGAGGCGGAAGCGGACCAGCTTGTCGATCTGCTCA
AGCGGCTGATCGACAAGCTGGATCGGATTGCCGGCGCCGAGGCTTCAGCGGTCGATTGA

Upstream 100 bases:

>100_bases
GAAACATTCGCTGTCGAAACGGCATTGTCGAAGTCCGTTCATGGAGATATATATGTGCATATATATCTTTCGGTCAAGCG
CGTGAGAATGGGGGAAGCGG

Downstream 100 bases:

>100_bases
CGAATTGCGACCAAGCGAAGGCCAGTTTCTATTCAGGGGCTGCGTGTCTTGTTCGGCGCCGTGCCGGCTTTTCGCGGGGA
GCGGCGGTTCTCCAGAACGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator Protein; MarR Family Transcriptional Regulatory Protein; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MGEDVLSTPGHLISLAARGFARLSEMRLKPLGFGVGQLPVLVALGDRKASTQRDLARFARVEQPPMAQMLARMERDGLIE
RTRDPADGRSSHIVLTKAAREAMPAAIAALFQGNSEALAGFTEAEADQLVDLLKRLIDKLDRIAGAEASAVD

Sequences:

>Translated_152_residues
MGEDVLSTPGHLISLAARGFARLSEMRLKPLGFGVGQLPVLVALGDRKASTQRDLARFARVEQPPMAQMLARMERDGLIE
RTRDPADGRSSHIVLTKAAREAMPAAIAALFQGNSEALAGFTEAEADQLVDLLKRLIDKLDRIAGAEASAVD
>Mature_151_residues
GEDVLSTPGHLISLAARGFARLSEMRLKPLGFGVGQLPVLVALGDRKASTQRDLARFARVEQPPMAQMLARMERDGLIER
TRDPADGRSSHIVLTKAAREAMPAAIAALFQGNSEALAGFTEAEADQLVDLLKRLIDKLDRIAGAEASAVD

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16318; Mature: 16187

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEDVLSTPGHLISLAARGFARLSEMRLKPLGFGVGQLPVLVALGDRKASTQRDLARFAR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHH
VEQPPMAQMLARMERDGLIERTRDPADGRSSHIVLTKAAREAMPAAIAALFQGNSEALAG
CCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHC
FTEAEADQLVDLLKRLIDKLDRIAGAEASAVD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GEDVLSTPGHLISLAARGFARLSEMRLKPLGFGVGQLPVLVALGDRKASTQRDLARFAR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHH
VEQPPMAQMLARMERDGLIERTRDPADGRSSHIVLTKAAREAMPAAIAALFQGNSEALAG
CCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHC
FTEAEADQLVDLLKRLIDKLDRIAGAEASAVD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA