| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yusP [H]
Identifier: 209547770
GI number: 209547770
Start: 156462
End: 157952
Strand: Reverse
Name: yusP [H]
Synonym: Rleg2_0160
Alternate gene names: 209547770
Gene position: 157952-156462 (Counterclockwise)
Preceding gene: 209547771
Following gene: 209547769
Centisome position: 3.48
GC content: 64.25
Gene sequence:
>1491_bases ATGTCGAATGCAGCGCATCGCTCGAACCGCGTGCTTGTCGTCGCGACCATCATGTTCGCAACCTTCATGGTGGCGATCGA GGCGACGATCGTGGCGACCGCGATGCCGCGCATTGTCGGGCAGCTCGGCGGTTTCTCCTATTACAGCTGGGTGTTTTCGG CCTTCCTGCTGGCGCAGTCGACGACAACCGTGATCTACGGCAAGCTTTCCGATATTTTCGGGCGCAAGCCGGTGCTGATC GGCGGCATCCTGATCTTCCTTCTCGGCTCTTTGCTCTGCGGGCTTGCCTGGTCGATGATGTCGCTGGTGCTGTTCCGGCT GCTGCAGGGGCTTGGCGCCGGCGCCATCCAGCCGGTGACGATGACGATCATCGGCGATCTGTTCAAGCTCGAGGAGCGCG GCCGCGTGCAGGGCGCGATGGCGACGGTGTGGGCGACGTCGGCCGTCGTCGGGCCGCTTGCCGGCGGCATCATCGTCGAC AATATTTCCTGGGCCTGGATCTTCTGGATCAACCTGCCGATCGGTATTCTCTCGATCATCGCCTTCATGATCTTCCTGAA GGAGGAGGTGGCGCACAAGCAGGCAAAGATCGATTACCTCGGATCGGTGCTGTTTTCGATCTCGATCGTCGCGCTGCTCG TCATGCTGACGGAAACCGATGCCAGCGCCTGGATCCTGCTGACGCTCTTTGCCGTCTTCATCATTGCGGGCCTGCTCTTC CTCGCCCAGGAGAAGCGGGCGCCGGAGCCGATCATTTCGATCCCGCTCTGGAGCCGCCGGCTGATCGCCACCAGCAATGC GGCAACGCTGCTCGCCGGCATGGCGCTGATCGGGCTTTCCACCATCCTGCCGATCTATGTGCAGGGCGTGCTCGGCCGCT CGCCGATCGTTGCCGGCTTCACGCTGACCATGCTCGTCGTCGGCTGGCCGCTGGCGGTGATGCTTTCCAGCCGCTTCTAT AAAGCCTTCGGCATCCGCCGGACGCTGCGCGTCGGCAGCCTGCTGTTTCCGTTCGGCGCCTGTTTCCTGCTGTTCCTGAC ACCGGAAAGTTCGCCCGCACTTGCCGGCGCCGGCTCCTTCTTCATGGGCTTCGGCATGGGGCTGATCAGCCTCACCAGCA TCGTGCTGGTGCAGGACAGCGTCGAATGGTCGATGCGCGGCAGCGCCACCGCCTCGATCATCTTTGCCCGCAGCCTCGGC AATACGCTCGGCGCCACCGTGCTCGGCGCCATCCTCAATGCCGGCATCAATCACTATGCTGGCGGCGAGGCGGCGGCCGG CCTGCACGAGGCGCTGAACCAGCCGACCGGGCTTTCGGCGCTCGCCGCCGACCCGGCGATCCGCGCCGTCTTCAATGCGG CGCTGCACTGGAGCTTTTGGGGCGTGGTCATCGTCGCGGTGCTGACCTTCTTCACCACCTGGCTGATCCCGGTCGGGCAT GGCCGGAAAAGCGAAGGCGCGGCCGTCGCAAGCGAGGCGACCTCGCATTAA
Upstream 100 bases:
>100_bases GGTTTCCAGGACGTAATAGTACCGCATCCCTCCGCAAGCGGCGATCGCCCGACCCAGCCTGCCATTTTCCGGCGTCCGCG GAGCACCCGAAGAGGTTGTC
Downstream 100 bases:
>100_bases GCGGTTCGGCTCACGACGCTTACGCCTCAGCTTACACGCCATCCCGGATATCGAAGCTAATAATCTTATCGCCTTCGATG CGGAAGATATGCGTGACGGT
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSNAAHRSNRVLVVATIMFATFMVAIEATIVATAMPRIVGQLGGFSYYSWVFSAFLLAQSTTTVIYGKLSDIFGRKPVLI GGILIFLLGSLLCGLAWSMMSLVLFRLLQGLGAGAIQPVTMTIIGDLFKLEERGRVQGAMATVWATSAVVGPLAGGIIVD NISWAWIFWINLPIGILSIIAFMIFLKEEVAHKQAKIDYLGSVLFSISIVALLVMLTETDASAWILLTLFAVFIIAGLLF LAQEKRAPEPIISIPLWSRRLIATSNAATLLAGMALIGLSTILPIYVQGVLGRSPIVAGFTLTMLVVGWPLAVMLSSRFY KAFGIRRTLRVGSLLFPFGACFLLFLTPESSPALAGAGSFFMGFGMGLISLTSIVLVQDSVEWSMRGSATASIIFARSLG NTLGATVLGAILNAGINHYAGGEAAAGLHEALNQPTGLSALAADPAIRAVFNAALHWSFWGVVIVAVLTFFTTWLIPVGH GRKSEGAAVASEATSH
Sequences:
>Translated_496_residues MSNAAHRSNRVLVVATIMFATFMVAIEATIVATAMPRIVGQLGGFSYYSWVFSAFLLAQSTTTVIYGKLSDIFGRKPVLI GGILIFLLGSLLCGLAWSMMSLVLFRLLQGLGAGAIQPVTMTIIGDLFKLEERGRVQGAMATVWATSAVVGPLAGGIIVD NISWAWIFWINLPIGILSIIAFMIFLKEEVAHKQAKIDYLGSVLFSISIVALLVMLTETDASAWILLTLFAVFIIAGLLF LAQEKRAPEPIISIPLWSRRLIATSNAATLLAGMALIGLSTILPIYVQGVLGRSPIVAGFTLTMLVVGWPLAVMLSSRFY KAFGIRRTLRVGSLLFPFGACFLLFLTPESSPALAGAGSFFMGFGMGLISLTSIVLVQDSVEWSMRGSATASIIFARSLG NTLGATVLGAILNAGINHYAGGEAAAGLHEALNQPTGLSALAADPAIRAVFNAALHWSFWGVVIVAVLTFFTTWLIPVGH GRKSEGAAVASEATSH >Mature_495_residues SNAAHRSNRVLVVATIMFATFMVAIEATIVATAMPRIVGQLGGFSYYSWVFSAFLLAQSTTTVIYGKLSDIFGRKPVLIG GILIFLLGSLLCGLAWSMMSLVLFRLLQGLGAGAIQPVTMTIIGDLFKLEERGRVQGAMATVWATSAVVGPLAGGIIVDN ISWAWIFWINLPIGILSIIAFMIFLKEEVAHKQAKIDYLGSVLFSISIVALLVMLTETDASAWILLTLFAVFIIAGLLFL AQEKRAPEPIISIPLWSRRLIATSNAATLLAGMALIGLSTILPIYVQGVLGRSPIVAGFTLTMLVVGWPLAVMLSSRFYK AFGIRRTLRVGSLLFPFGACFLLFLTPESSPALAGAGSFFMGFGMGLISLTSIVLVQDSVEWSMRGSATASIIFARSLGN TLGATVLGAILNAGINHYAGGEAAAGLHEALNQPTGLSALAADPAIRAVFNAALHWSFWGVVIVAVLTFFTTWLIPVGHG RKSEGAAVASEATSH
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=415, Percent_Identity=27.9518072289157, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790195, Length=318, Percent_Identity=27.6729559748428, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI1789042, Length=415, Percent_Identity=26.9879518072289, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1788710, Length=286, Percent_Identity=27.6223776223776, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1788392, Length=325, Percent_Identity=28, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790146, Length=165, Percent_Identity=29.6969696969697, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788509, Length=144, Percent_Identity=30.5555555555556, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6322958, Length=462, Percent_Identity=26.6233766233766, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6323735, Length=447, Percent_Identity=25.7270693512304, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6321663, Length=146, Percent_Identity=32.8767123287671, Blast_Score=94, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6325455, Length=154, Percent_Identity=29.2207792207792, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319770, Length=380, Percent_Identity=24.7368421052632, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319783, Length=375, Percent_Identity=25.3333333333333, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324264, Length=131, Percent_Identity=29.0076335877863, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 52674; Mature: 52543
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAAHRSNRVLVVATIMFATFMVAIEATIVATAMPRIVGQLGGFSYYSWVFSAFLLAQS CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC TTTVIYGKLSDIFGRKPVLIGGILIFLLGSLLCGLAWSMMSLVLFRLLQGLGAGAIQPVT CHHEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH MTIIGDLFKLEERGRVQGAMATVWATSAVVGPLAGGIIVDNISWAWIFWINLPIGILSII HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCHHHHHHH AFMIFLKEEVAHKQAKIDYLGSVLFSISIVALLVMLTETDASAWILLTLFAVFIIAGLLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LAQEKRAPEPIISIPLWSRRLIATSNAATLLAGMALIGLSTILPIYVQGVLGRSPIVAGF HHHHCCCCCCEEECCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TLTMLVVGWPLAVMLSSRFYKAFGIRRTLRVGSLLFPFGACFLLFLTPESSPALAGAGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHH FMGFGMGLISLTSIVLVQDSVEWSMRGSATASIIFARSLGNTLGATVLGAILNAGINHYA HHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC GGEAAAGLHEALNQPTGLSALAADPAIRAVFNAALHWSFWGVVIVAVLTFFTTWLIPVGH CCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GRKSEGAAVASEATSH CCCCCCCHHHHCCCCC >Mature Secondary Structure SNAAHRSNRVLVVATIMFATFMVAIEATIVATAMPRIVGQLGGFSYYSWVFSAFLLAQS CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC TTTVIYGKLSDIFGRKPVLIGGILIFLLGSLLCGLAWSMMSLVLFRLLQGLGAGAIQPVT CHHEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH MTIIGDLFKLEERGRVQGAMATVWATSAVVGPLAGGIIVDNISWAWIFWINLPIGILSII HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCHHHHHHH AFMIFLKEEVAHKQAKIDYLGSVLFSISIVALLVMLTETDASAWILLTLFAVFIIAGLLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LAQEKRAPEPIISIPLWSRRLIATSNAATLLAGMALIGLSTILPIYVQGVLGRSPIVAGF HHHHCCCCCCEEECCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TLTMLVVGWPLAVMLSSRFYKAFGIRRTLRVGSLLFPFGACFLLFLTPESSPALAGAGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHH FMGFGMGLISLTSIVLVQDSVEWSMRGSATASIIFARSLGNTLGATVLGAILNAGINHYA HHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC GGEAAAGLHEALNQPTGLSALAADPAIRAVFNAALHWSFWGVVIVAVLTFFTTWLIPVGH CCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GRKSEGAAVASEATSH CCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]