| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209400958
Identifier: 209400958
GI number: 209400958
Start: 2073318
End: 2073959
Strand: Reverse
Name: 209400958
Synonym: ECH74115_2161
Alternate gene names: NA
Gene position: 2073959-2073318 (Counterclockwise)
Preceding gene: 209397140
Following gene: 209399099
Centisome position: 37.22
GC content: 36.92
Gene sequence:
>642_bases ATGCCTGTAGATTTAACGCCTTATATTTTACCTGGGGTTAGTTTTTTGTCTGACATTCCTCAAGAAACCTTGTCTGAGAT ACGTAATCAGACTATTCGTGGAGAAGCTCAAGTAAGACTGGGTGAGTTGATGGTGTCAATACGACCTATGCAGGTAAATG GATATTTTATGGGAAGTCTTAACCAGGATGGTTTATCGAATGATAACATCCAGATTGGCCTTCAATATATAGAACATATT GAACGTACACTTAATCATGGTAGTTTGACAAGCCGTGAAGTTACAGTACTGCGTGAAATTGAGATGCTCGAAAATATGGA ATTGCTTTCTAACTACCAGTTAGAGGAGTTGTTAGATAAAATTGAAGTATGTGCATTTAATGTGGAGCATGCACAATTGC AAGTGCCAGAGAGCTTACGAACATGCCCTGTTACATTATGTGAACCAGAAGATGGGGTATTTATGAGGAATTCAATGAAT TCAAATGTTTGTATGTTGTATGATAAAATGGCATTAATATATCTTGTTAAAACAAGGGCGGCTCATCCTTTGAGCAGGGA ATCAATCGCAGTTTCAATGATTGTAGGAAGAGATAATTGTGCTTTTGACTCTGACAGAGGTAACTTCGTTTTAAAAAATT AA
Upstream 100 bases:
>100_bases AGCTTTTTGTTGTAAGTGATAATTAATGCTATAAATATAGTTTTGTGTATTTTTATTTTTTACTAAAGCAAAATTAAATT ATTAAAATGGAGGGAGAGGA
Downstream 100 bases:
>100_bases GATAGCAATGGCGGGTTAACTTTTCGTAAAATGAAATTAATTCTCGGTACAGCATGTAAAACGCGGCACCTCGTATGCAA GAACGTGCTGCGGTTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: T3SS Secreted Effector NleG-Like Protein; T3SS Effector; T3SS Secreted Effector NleI/NleG Homolog
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPVDLTPYILPGVSFLSDIPQETLSEIRNQTIRGEAQVRLGELMVSIRPMQVNGYFMGSLNQDGLSNDNIQIGLQYIEHI ERTLNHGSLTSREVTVLREIEMLENMELLSNYQLEELLDKIEVCAFNVEHAQLQVPESLRTCPVTLCEPEDGVFMRNSMN SNVCMLYDKMALIYLVKTRAAHPLSRESIAVSMIVGRDNCAFDSDRGNFVLKN
Sequences:
>Translated_213_residues MPVDLTPYILPGVSFLSDIPQETLSEIRNQTIRGEAQVRLGELMVSIRPMQVNGYFMGSLNQDGLSNDNIQIGLQYIEHI ERTLNHGSLTSREVTVLREIEMLENMELLSNYQLEELLDKIEVCAFNVEHAQLQVPESLRTCPVTLCEPEDGVFMRNSMN SNVCMLYDKMALIYLVKTRAAHPLSRESIAVSMIVGRDNCAFDSDRGNFVLKN >Mature_212_residues PVDLTPYILPGVSFLSDIPQETLSEIRNQTIRGEAQVRLGELMVSIRPMQVNGYFMGSLNQDGLSNDNIQIGLQYIEHIE RTLNHGSLTSREVTVLREIEMLENMELLSNYQLEELLDKIEVCAFNVEHAQLQVPESLRTCPVTLCEPEDGVFMRNSMNS NVCMLYDKMALIYLVKTRAAHPLSRESIAVSMIVGRDNCAFDSDRGNFVLKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24113; Mature: 23982
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVDLTPYILPGVSFLSDIPQETLSEIRNQTIRGEAQVRLGELMVSIRPMQVNGYFMGSL CCCCCCCHHHHCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHEEEEEEEEEECCEEEECC NQDGLSNDNIQIGLQYIEHIERTLNHGSLTSREVTVLREIEMLENMELLSNYQLEELLDK CCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IEVCAFNVEHAQLQVPESLRTCPVTLCEPEDGVFMRNSMNSNVCMLYDKMALIYLVKTRA HHHHEECCCHHEEECCHHHCCCCEEEECCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHC AHPLSRESIAVSMIVGRDNCAFDSDRGNFVLKN CCCCCCCCEEEEEEEECCCCCCCCCCCCEEECC >Mature Secondary Structure PVDLTPYILPGVSFLSDIPQETLSEIRNQTIRGEAQVRLGELMVSIRPMQVNGYFMGSL CCCCCCHHHHCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHEEEEEEEEEECCEEEECC NQDGLSNDNIQIGLQYIEHIERTLNHGSLTSREVTVLREIEMLENMELLSNYQLEELLDK CCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IEVCAFNVEHAQLQVPESLRTCPVTLCEPEDGVFMRNSMNSNVCMLYDKMALIYLVKTRA HHHHEECCCHHEEECCHHHCCCCEEEECCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHC AHPLSRESIAVSMIVGRDNCAFDSDRGNFVLKN CCCCCCCCEEEEEEEECCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA