| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209397140
Identifier: 209397140
GI number: 209397140
Start: 2074041
End: 2074442
Strand: Reverse
Name: 209397140
Synonym: ECH74115_2162
Alternate gene names: NA
Gene position: 2074442-2074041 (Counterclockwise)
Preceding gene: 209396587
Following gene: 209400958
Centisome position: 37.23
GC content: 37.56
Gene sequence:
>402_bases GTGGCTCTGGAAAGGCAATTAAATGGAGGTGTCGATTTTTTAAGTAGTGTTAATAACTATTTTCAGAGTGTCATGGCAGA ACACAGAGAAAATAAAACAGGTAATAAAATATTAATGGAAAAAATAAATTCTTGTGTATTTGGAACGGATTCTAATCACT TTTCTTGCCCGGAGTCATTTTTGACATGCCCGATAACGCTGGACACACCTGAGACTGGAGTGTTCATGAGAAACTCACGA GGTGCTGAGATATGCTCTCTATATGATAAGGATGCGTTAGTGCAACTTGTTGAAACTGGTGGAACTCATCCTCTGAGTCG AGAACCTATAACAGAATCAATGATTATGAGAAAAGACGAATGTCACTTTGATGCAAAAAGAGAAGCTTTTTGTTGTAAGT GA
Upstream 100 bases:
>100_bases TCACTATGTCCAACTACTGGATGGATTTTCAGTTGAACCGGTGAGAGGAGGCTTACTGGATAGGCTATTGGGGCGTGAGC ATCGAATGGATAGAAGGGCT
Downstream 100 bases:
>100_bases TAATTAATGCTATAAATATAGTTTTGTGTATTTTTATTTTTTACTAAAGCAAAATTAAATTATTAAAATGGAGGGAGAGG AATGCCTGTAGATTTAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: T3SS Secreted Effector NleG-Like Protein; T3SS Effector; T3SS Secreted Effector NleI/NleG Homolog
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MALERQLNGGVDFLSSVNNYFQSVMAEHRENKTGNKILMEKINSCVFGTDSNHFSCPESFLTCPITLDTPETGVFMRNSR GAEICSLYDKDALVQLVETGGTHPLSREPITESMIMRKDECHFDAKREAFCCK
Sequences:
>Translated_133_residues MALERQLNGGVDFLSSVNNYFQSVMAEHRENKTGNKILMEKINSCVFGTDSNHFSCPESFLTCPITLDTPETGVFMRNSR GAEICSLYDKDALVQLVETGGTHPLSREPITESMIMRKDECHFDAKREAFCCK >Mature_132_residues ALERQLNGGVDFLSSVNNYFQSVMAEHRENKTGNKILMEKINSCVFGTDSNHFSCPESFLTCPITLDTPETGVFMRNSRG AEICSLYDKDALVQLVETGGTHPLSREPITESMIMRKDECHFDAKREAFCCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14963; Mature: 14832
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALERQLNGGVDFLSSVNNYFQSVMAEHRENKTGNKILMEKINSCVFGTDSNHFSCPESF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHH LTCPITLDTPETGVFMRNSRGAEICSLYDKDALVQLVETGGTHPLSREPITESMIMRKDE EEECEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC CHFDAKREAFCCK CCCCCCCCCCCCC >Mature Secondary Structure ALERQLNGGVDFLSSVNNYFQSVMAEHRENKTGNKILMEKINSCVFGTDSNHFSCPESF CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHH LTCPITLDTPETGVFMRNSRGAEICSLYDKDALVQLVETGGTHPLSREPITESMIMRKDE EEECEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC CHFDAKREAFCCK CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA