| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209397892
Identifier: 209397892
GI number: 209397892
Start: 4448228
End: 4448692
Strand: Direct
Name: 209397892
Synonym: ECH74115_4812
Alternate gene names: NA
Gene position: 4448228-4448692 (Clockwise)
Preceding gene: 209395803
Following gene: 209397871
Centisome position: 79.83
GC content: 59.14
Gene sequence:
>465_bases GTGAGCCACTATTTATCCCCCGGCGCTTATCTGCCCCACGACGCGCCCATGTTACTGCTGGAAGACGTGGTGAGCGTCAG CGATGACAGCGCGGTGTGCCGCGTGACGGTTTCGCCCAGTGGCGTACTGGCACCGTTTCTCGACCCGGACGGCAATCTCC CCGGCTGGTTTACCCTTGAACTGATGGCGCAAACCGTCGGCGTCTGGTCTGGCTGGCATCGCCACCAGCAGGGCAAAAAC AGTATTGAGTTAGGGATGATACTGGGCGCGCGTGAATTGCTTTGCACCACTGGCATTCTGCCCGCAGGCCAGACACTGAC CATTACCGTCAAACTGCTGATGCAAGACGATCGCTTCGGCAGTTTTGAGTGCAGCATCAACGACGGCGAGGCGACGGGCC GCATTAACACCTTCCAGCCGACCGCGGAAGAACTTACCACCCTGTTTCAACAAGGAGCGTCCTGA
Upstream 100 bases:
>100_bases GCATTATCGAAAAACCGCAGCCGCTGGCACGTCCGGTGATCCTGTCCAATTCCTTCGCCTTTGGCGGCAATAACGCCAGC ATTCTGCTCGGGAGGGTTTC
Downstream 100 bases:
>100_bases TGAGTCGTTCAGTTCTGGTTACTGGTGCCAGCAAAGGCATTGGTCGCGCCATCGCCTGCCAACTGGCGGCAGACGGCTTT AACATTGGCGTTCACTATCA
Product: fabA-like domain protein
Products: NA
Alternate protein names: 3-Hydroxylacyl-(Acyl Carrier Protein) Dehydratase; Thioester Dehydrase Family Protein; Dehydratase; FabA-Like Domain-Containing Protein; Beta-Ketoacyl Synthase; 3-Hydroxy-Fatty Acyl-(Acyl Carrier Protein) Dehydratase
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSHYLSPGAYLPHDAPMLLLEDVVSVSDDSAVCRVTVSPSGVLAPFLDPDGNLPGWFTLELMAQTVGVWSGWHRHQQGKN SIELGMILGARELLCTTGILPAGQTLTITVKLLMQDDRFGSFECSINDGEATGRINTFQPTAEELTTLFQQGAS
Sequences:
>Translated_154_residues MSHYLSPGAYLPHDAPMLLLEDVVSVSDDSAVCRVTVSPSGVLAPFLDPDGNLPGWFTLELMAQTVGVWSGWHRHQQGKN SIELGMILGARELLCTTGILPAGQTLTITVKLLMQDDRFGSFECSINDGEATGRINTFQPTAEELTTLFQQGAS >Mature_153_residues SHYLSPGAYLPHDAPMLLLEDVVSVSDDSAVCRVTVSPSGVLAPFLDPDGNLPGWFTLELMAQTVGVWSGWHRHQQGKNS IELGMILGARELLCTTGILPAGQTLTITVKLLMQDDRFGSFECSINDGEATGRINTFQPTAEELTTLFQQGAS
Specific function: Unknown
COG id: COG4706
COG function: function code I; Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16621; Mature: 16490
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHYLSPGAYLPHDAPMLLLEDVVSVSDDSAVCRVTVSPSGVLAPFLDPDGNLPGWFTLE CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEHHH LMAQTVGVWSGWHRHQQGKNSIELGMILGARELLCTTGILPAGQTLTITVKLLMQDDRFG HHHHHHHHHCCHHHHHCCCCCEEEEEEECHHHHHHHCCCCCCCCEEEEEEEEEEECCCCC SFECSINDGEATGRINTFQPTAEELTTLFQQGAS CEEEEECCCCCCCEEECCCCCHHHHHHHHHCCCC >Mature Secondary Structure SHYLSPGAYLPHDAPMLLLEDVVSVSDDSAVCRVTVSPSGVLAPFLDPDGNLPGWFTLE CCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEHHH LMAQTVGVWSGWHRHQQGKNSIELGMILGARELLCTTGILPAGQTLTITVKLLMQDDRFG HHHHHHHHHCCHHHHHCCCCCEEEEEEECHHHHHHHCCCCCCCCEEEEEEEEEEECCCCC SFECSINDGEATGRINTFQPTAEELTTLFQQGAS CEEEEECCCCCCCEEECCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA