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The map label for this gene is 209696428

Identifier: 209696428

GI number: 209696428

Start: 3292255

End: 3292950

Strand: Direct

Name: 209696428

Synonym: VSAL_I3041

Alternate gene names: NA

Gene position: 3292255-3292950 (Clockwise)

Preceding gene: 209696427

Following gene: 209696429

Centisome position: 99.01

GC content: 38.65

Gene sequence:

>696_bases
ATGATTAAAGTAATAGTGTTATCTCTGAAAGATTCACCTCGTCGTGCAATCATCACAGAGAGACTAAAGAAACGTGGCAT
TACAGATTTCGAGTTCTATGATGCTTTTGATGCAAGAGCTATGGAAATATCGGATTTAGAGAAACTGTTCGACGTTAAAA
GGTTCCGTGACACTTACGGGCGTGAACCTGCTAGGGGTGAGATTGGTTGTACTCTAAGCCACTTAGGTATTTGGAAGCGA
ATCTCCGAAAGCGATTGTGAGAATTGGATGGTACTAGAAGACGACGCAATACTTATGCCTTGGTTTGGTATCCTCTTTAG
AGAAGGGAATTACCCTTCAAATCTGACGATTCTTGGACATTCAAAACTTAGTGTATGGAAAGGTTTTTTATCTAACATTA
AGCGGATTGTTATTAAGCCTAATCTGATAGCTTCTGTTAGAAAGTTTGGATATCTACTTGGTGAGAAGAGTGAATATCAT
TGGTATGGTACTGTAGGTTTCGCTTTGCCTAAGGTTAGTGCAATCAAGTTGGACAAAGAACTTGGTACATACCCCTTCTT
CTTAGCCGATGATTTCTTGATTTACAGTAAATATGTGACAATCAATCACGCGCACCCGTATTTCGTATATGAAGATTTTT
CAGGATTAGAAAGTACGATTGAACATGAGCGAGTTATGAATAAAAAGGATTCGTAG

Upstream 100 bases:

>100_bases
TTTATACCAGACTATGCGTTTTCACTTTGTACCACCTTAATGTCCTTCTTTTTAATTTGGACATTAAGAGTAGAATGTAA
ATTTATGGAGTCATTGAAAA

Downstream 100 bases:

>100_bases
TGAATAGTAATTTTGTTGGTTCTGTCGCATCTATATTGCAACTTTTATCAAAATTAGCTCTCAAAGCTCAATGTTTGGTT
CTATCGCAAAGTTTAGGTTA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MIKVIVLSLKDSPRRAIITERLKKRGITDFEFYDAFDARAMEISDLEKLFDVKRFRDTYGREPARGEIGCTLSHLGIWKR
ISESDCENWMVLEDDAILMPWFGILFREGNYPSNLTILGHSKLSVWKGFLSNIKRIVIKPNLIASVRKFGYLLGEKSEYH
WYGTVGFALPKVSAIKLDKELGTYPFFLADDFLIYSKYVTINHAHPYFVYEDFSGLESTIEHERVMNKKDS

Sequences:

>Translated_231_residues
MIKVIVLSLKDSPRRAIITERLKKRGITDFEFYDAFDARAMEISDLEKLFDVKRFRDTYGREPARGEIGCTLSHLGIWKR
ISESDCENWMVLEDDAILMPWFGILFREGNYPSNLTILGHSKLSVWKGFLSNIKRIVIKPNLIASVRKFGYLLGEKSEYH
WYGTVGFALPKVSAIKLDKELGTYPFFLADDFLIYSKYVTINHAHPYFVYEDFSGLESTIEHERVMNKKDS
>Mature_231_residues
MIKVIVLSLKDSPRRAIITERLKKRGITDFEFYDAFDARAMEISDLEKLFDVKRFRDTYGREPARGEIGCTLSHLGIWKR
ISESDCENWMVLEDDAILMPWFGILFREGNYPSNLTILGHSKLSVWKGFLSNIKRIVIKPNLIASVRKFGYLLGEKSEYH
WYGTVGFALPKVSAIKLDKELGTYPFFLADDFLIYSKYVTINHAHPYFVYEDFSGLESTIEHERVMNKKDS

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002654 [H]

Pfam domain/function: PF01755 Glyco_transf_25 [H]

EC number: NA

Molecular weight: Translated: 26839; Mature: 26839

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVIVLSLKDSPRRAIITERLKKRGITDFEFYDAFDARAMEISDLEKLFDVKRFRDTYG
CEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
REPARGEIGCTLSHLGIWKRISESDCENWMVLEDDAILMPWFGILFREGNYPSNLTILGH
CCCCCCCCCEEHHHHHHHHHHCCCCCCCCEEECCCEEEHHHHHHEEECCCCCCCEEEEEC
SKLSVWKGFLSNIKRIVIKPNLIASVRKFGYLLGEKSEYHWYGTVGFALPKVSAIKLDKE
CHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCEEEEHHH
LGTYPFFLADDFLIYSKYVTINHAHPYFVYEDFSGLESTIEHERVMNKKDS
CCCCCEEHHCCEEEEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIKVIVLSLKDSPRRAIITERLKKRGITDFEFYDAFDARAMEISDLEKLFDVKRFRDTYG
CEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
REPARGEIGCTLSHLGIWKRISESDCENWMVLEDDAILMPWFGILFREGNYPSNLTILGH
CCCCCCCCCEEHHHHHHHHHHCCCCCCCCEEECCCEEEHHHHHHEEECCCCCCCEEEEEC
SKLSVWKGFLSNIKRIVIKPNLIASVRKFGYLLGEKSEYHWYGTVGFALPKVSAIKLDKE
CHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCEEEEHHH
LGTYPFFLADDFLIYSKYVTINHAHPYFVYEDFSGLESTIEHERVMNKKDS
CCCCCEEHHCCEEEEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]