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The map label for this gene is yjeK [H]

Identifier: 209696199

GI number: 209696199

Start: 3025142

End: 3026164

Strand: Direct

Name: yjeK [H]

Synonym: VSAL_I2793

Alternate gene names: 209696199

Gene position: 3025142-3026164 (Clockwise)

Preceding gene: 209696197

Following gene: 209696203

Centisome position: 90.98

GC content: 40.18

Gene sequence:

>1023_bases
ATGTCACACATAATAACCCGAAATGACGCTCCTGTTGAGCAAAACTGGCTCAAAGAGATCTCAAATGCGATCTCAGATCC
TCATCAACTGCTTTCAACTCTAGGGATTGATAGCTCGCCTTGGGAGAAAGGATTAGAAGCGAAAAAGTTATTTGCGTTAC
GTGTGCCGACAAGTTTTGTCGATCGAATGGAGTTTGGCAACCCTTTTGATCCTTTATTACGCCAAGTATTGCCTTTAGAT
CAAGAATTCGAAGTACATGACGGATATTCCACCGATCCTCTTGACGAACAAGACAACGAACAACCCGGATTACTTCATAA
GTATAAAAACCGTGTTTTGTTAATTTTGAAAGGGGGCTGCGCGGTAAATTGTCGTTATTGTTTCCGTCGCCATTTTCCTT
ATGAAGATAATAAAGGCGGAAAATCAGTCTGGCAAAATTCCATCAACTATATTGCAGCGCACCCTGAGCTCAATGAAGTG
ATTCTTTCTGGTGGCGATCCTTTGATGGCAAAAGACCATGAACTTGAATGGTTAATTCAACATCTCGACAAAGTACCGCA
TATTAAACGTCTTCGTATTCACAGCCGTTTGCCTGTTGTCATTCCGAATCGAATTACGGATACATTATGCCGTCTATTTG
CAGAGACTCGACTTCAAGTTATTTTGGTTACGCACATCAACCATGCCAATGAAATTAGTCCCTATTTCACAGATAAAATG
ACACAACTAAAACAAGCAAACGTCACGTTATTAAACCAAAGCGTATTACTAAAAGGCATTAACGACACATCGAAGGCTTT
AACTAATTTAAGTGAAGCGCTATTTGATGCAGGGATCTTACCTTACTACCTTCATGTGTTAGACAAAGTGCAAGGTGCAG
CGCATTTCTTTGTCTCTGATGAAAAAGCGAAAGAATTAATGGCAGAGCTAATAGAAAACGTATCAGGTTATCTTGTACCA
ACACTAGCAAGAGAGATTGGTGGCCGAAAAAGCAAAACACCACTCGACTTATATTTAGAATAG

Upstream 100 bases:

>100_bases
GAGCATGGCTCGTTATCAAACATAAATTTCAAACCGCCTTTGAATTCATTGGTACTTACTGACGCCATGATTTCCTCTTA
ACATCGTTGAGTTATAAATA

Downstream 100 bases:

>100_bases
AGCGATATAAATCGACCTATTTTCCAGATATAAAAAAACCGAAGCTTATACTTCGGTTTTTCTTTTATAACTTAACAGTA
TTCTAAATTAGAATAACTCT

Product: hypothetical protein

Products: (3S)-3,6-diaminohexanoate

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSHIITRNDAPVEQNWLKEISNAISDPHQLLSTLGIDSSPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLD
QEFEVHDGYSTDPLDEQDNEQPGLLHKYKNRVLLILKGGCAVNCRYCFRRHFPYEDNKGGKSVWQNSINYIAAHPELNEV
ILSGGDPLMAKDHELEWLIQHLDKVPHIKRLRIHSRLPVVIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKM
TQLKQANVTLLNQSVLLKGINDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSDEKAKELMAELIENVSGYLVP
TLAREIGGRKSKTPLDLYLE

Sequences:

>Translated_340_residues
MSHIITRNDAPVEQNWLKEISNAISDPHQLLSTLGIDSSPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLD
QEFEVHDGYSTDPLDEQDNEQPGLLHKYKNRVLLILKGGCAVNCRYCFRRHFPYEDNKGGKSVWQNSINYIAAHPELNEV
ILSGGDPLMAKDHELEWLIQHLDKVPHIKRLRIHSRLPVVIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKM
TQLKQANVTLLNQSVLLKGINDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSDEKAKELMAELIENVSGYLVP
TLAREIGGRKSKTPLDLYLE
>Mature_339_residues
SHIITRNDAPVEQNWLKEISNAISDPHQLLSTLGIDSSPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQ
EFEVHDGYSTDPLDEQDNEQPGLLHKYKNRVLLILKGGCAVNCRYCFRRHFPYEDNKGGKSVWQNSINYIAAHPELNEVI
LSGGDPLMAKDHELEWLIQHLDKVPHIKRLRIHSRLPVVIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKMT
QLKQANVTLLNQSVLLKGINDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSDEKAKELMAELIENVSGYLVPT
LAREIGGRKSKTPLDLYLE

Specific function: With YjeA might be involved in the post-translational modification of elongation factor P (EF-P) [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=342, Percent_Identity=63.4502923976608, Blast_Score=458, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022462
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: 5.4.3.2

Molecular weight: Translated: 38674; Mature: 38543

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHIITRNDAPVEQNWLKEISNAISDPHQLLSTLGIDSSPWEKGLEAKKLFALRVPTSFV
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHCCCHHHEEEEECCHHHH
DRMEFGNPFDPLLRQVLPLDQEFEVHDGYSTDPLDEQDNEQPGLLHKYKNRVLLILKGGC
HHHHCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCC
AVNCRYCFRRHFPYEDNKGGKSVWQNSINYIAAHPELNEVILSGGDPLMAKDHELEWLIQ
EEEHHHHHHHCCCCCCCCCHHHHHHCCCCEEEECCCHHHHEECCCCCCCCCCCHHHHHHH
HLDKVPHIKRLRIHSRLPVVIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKM
HHHHCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHH
TQLKQANVTLLNQSVLLKGINDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSD
HHHHHCCHHEECHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHEEEECC
EKAKELMAELIENVSGYLVPTLAREIGGRKSKTPLDLYLE
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure 
SHIITRNDAPVEQNWLKEISNAISDPHQLLSTLGIDSSPWEKGLEAKKLFALRVPTSFV
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHCCCHHHEEEEECCHHHH
DRMEFGNPFDPLLRQVLPLDQEFEVHDGYSTDPLDEQDNEQPGLLHKYKNRVLLILKGGC
HHHHCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCC
AVNCRYCFRRHFPYEDNKGGKSVWQNSINYIAAHPELNEVILSGGDPLMAKDHELEWLIQ
EEEHHHHHHHCCCCCCCCCHHHHHHCCCCEEEECCCHHHHEECCCCCCCCCCCHHHHHHH
HLDKVPHIKRLRIHSRLPVVIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKM
HHHHCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHH
TQLKQANVTLLNQSVLLKGINDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSD
HHHHHCCHHEECHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHEEEECC
EKAKELMAELIENVSGYLVPTLAREIGGRKSKTPLDLYLE
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-lysine

Specific reaction: L-lysine = (3S)-3,6-diaminohexanoate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]