| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is yjeT [C]
Identifier: 209696179
GI number: 209696179
Start: 3003352
End: 3003537
Strand: Reverse
Name: yjeT [C]
Synonym: VSAL_I2773
Alternate gene names: 209696179
Gene position: 3003537-3003352 (Counterclockwise)
Preceding gene: 209696180
Following gene: 209696178
Centisome position: 90.33
GC content: 41.94
Gene sequence:
>186_bases ATGAGTAATGCAGTGTGGTTAGCGATTGGTGGTGTGCTTATTGTTGAGGGATTAGGTCCATTAATTGCCCCTGATGGATG GCGAAATATGGTCGCTCAATTAAGTGAACAACCGAATAATACGTTGCGTCGTATTGGTGGTTGTTTAGTGGTTTCTGGTC TTGTTATTTGCAGTATGATGCTTTGA
Upstream 100 bases:
>100_bases GGGTGGGAAATAAGTCTAGTTCTAGATTTTAATTCACTCTAATTTAAACAAGGTCCTTCGGGACCTTGTTTTGTTTCTGC TCGATAGATAAGGGTACATA
Downstream 100 bases:
>100_bases GTTTTACCTAAATATAAAATCGTAATCTTGTTTTTGATTTCATTCAAAAAAATAAATAATGATATTGTGTAGATTGACAG CGCTTTATTGTGAAAGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MSNAVWLAIGGVLIVEGLGPLIAPDGWRNMVAQLSEQPNNTLRRIGGCLVVSGLVICSMML
Sequences:
>Translated_61_residues MSNAVWLAIGGVLIVEGLGPLIAPDGWRNMVAQLSEQPNNTLRRIGGCLVVSGLVICSMML >Mature_60_residues SNAVWLAIGGVLIVEGLGPLIAPDGWRNMVAQLSEQPNNTLRRIGGCLVVSGLVICSMML
Specific function: Unknown
COG id: COG3242
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6436; Mature: 6305
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAVWLAIGGVLIVEGLGPLIAPDGWRNMVAQLSEQPNNTLRRIGGCLVVSGLVICSMM CCCCEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC L C >Mature Secondary Structure SNAVWLAIGGVLIVEGLGPLIAPDGWRNMVAQLSEQPNNTLRRIGGCLVVSGLVICSMM CCCEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA