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The map label for this gene is sspB [H]

Identifier: 209696066

GI number: 209696066

Start: 2876810

End: 2877265

Strand: Reverse

Name: sspB [H]

Synonym: VSAL_I2658

Alternate gene names: 209696066

Gene position: 2877265-2876810 (Counterclockwise)

Preceding gene: 209696067

Following gene: 209696061

Centisome position: 86.53

GC content: 41.01

Gene sequence:

>456_bases
ATGGATATTAGTTCTATGATGCCTCGTCGCCCATATTTATTACGTGCTTTTTATGAATGGATTGTAGATAACGAGTTGAC
TCCTCATCTTGTTGTTGATGCCACTATGAATGGTGTTCGTGTACCTGAAGAGTTTATCCAAGATGGACAGATTATTTTAA
ATACTGCCCCTCACTCTGTTGGTAATTTAGAAATGGGAAACGAAGCGGTAACGTTTAATGCTCGTTTTAGCGGTCGTCCT
CATTCGATCATTGTGCCAATTTATGCAATTCAAGCTATCTATGCCCGTGAGAATGGTGCTGGGACTATGTTTGAACCTGA
AGAAGCTTATGAGATGGATGCTGATGAAGGTATCTTCGAAGATGAATCATTAGATTCAACTGAAAATACGCTATCTGATG
ATAAACCCGAGCCACCACGCCCAAGTGGTCGTCCGAGTTTACGAGTCGTCAAATAA

Upstream 100 bases:

>100_bases
GTTCTAAAGAGATGAAAGTGTATATGAATCGTGTATTTGAACGAGATTCATTCCTAGCATCTTTAACTGAAATTGAACGT
GAAATGCGTCTAACGAACTA

Downstream 100 bases:

>100_bases
AAAAAAGCCTGCATATGTGCAGGCTTTTTTGTATGTCTTTATTTATCTACTTTTTAACACTGTCGCCTTGACCATATTCA
AACGCTTTTATAACCCCTTT

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MDISSMMPRRPYLLRAFYEWIVDNELTPHLVVDATMNGVRVPEEFIQDGQIILNTAPHSVGNLEMGNEAVTFNARFSGRP
HSIIVPIYAIQAIYARENGAGTMFEPEEAYEMDADEGIFEDESLDSTENTLSDDKPEPPRPSGRPSLRVVK

Sequences:

>Translated_151_residues
MDISSMMPRRPYLLRAFYEWIVDNELTPHLVVDATMNGVRVPEEFIQDGQIILNTAPHSVGNLEMGNEAVTFNARFSGRP
HSIIVPIYAIQAIYARENGAGTMFEPEEAYEMDADEGIFEDESLDSTENTLSDDKPEPPRPSGRPSLRVVK
>Mature_151_residues
MDISSMMPRRPYLLRAFYEWIVDNELTPHLVVDATMNGVRVPEEFIQDGQIILNTAPHSVGNLEMGNEAVTFNARFSGRP
HSIIVPIYAIQAIYARENGAGTMFEPEEAYEMDADEGIFEDESLDSTENTLSDDKPEPPRPSGRPSLRVVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=131, Percent_Identity=61.8320610687023, Blast_Score=172, Evalue=7e-45,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 16956; Mature: 16956

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISSMMPRRPYLLRAFYEWIVDNELTPHLVVDATMNGVRVPEEFIQDGQIILNTAPHSV
CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCEEEEECCCCCC
GNLEMGNEAVTFNARFSGRPHSIIVPIYAIQAIYARENGAGTMFEPEEAYEMDADEGIFE
CCEEECCEEEEEEEEECCCCCEEEEHHHHHEEEECCCCCCCCCCCCHHHHCCCCCCCCCC
DESLDSTENTLSDDKPEPPRPSGRPSLRVVK
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MDISSMMPRRPYLLRAFYEWIVDNELTPHLVVDATMNGVRVPEEFIQDGQIILNTAPHSV
CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCEEEEECCCCCC
GNLEMGNEAVTFNARFSGRPHSIIVPIYAIQAIYARENGAGTMFEPEEAYEMDADEGIFE
CCEEECCEEEEEEEEECCCCCEEEEHHHHHEEEECCCCCCCCCCCCHHHHCCCCCCCCCC
DESLDSTENTLSDDKPEPPRPSGRPSLRVVK
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]