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The map label for this gene is rsmI [H]

Identifier: 209696061

GI number: 209696061

Start: 2872413

End: 2873276

Strand: Reverse

Name: rsmI [H]

Synonym: VSAL_I2653

Alternate gene names: 209696061

Gene position: 2873276-2872413 (Counterclockwise)

Preceding gene: 209696066

Following gene: 209696060

Centisome position: 86.41

GC content: 41.67

Gene sequence:

>864_bases
ATGACAGATCACAATTTATCTGTGGTAGAGGCTGCAACTTTGTACATTGTACCTACCCCAATCGGTAATTTAGGCGACAT
AACCCAACGAGCTTTGGATGTTTTAAAATCCGTAGACTTGATTGCGGCTGAAGATACCCGACATACAGGCAGGTTATTGT
CTCATTTTGGCATTTCTAGTCAAACGTTTGCATTACATGATCACAATGAACAGCATAAAGCAGACCTTCTAATCAGTAAA
TTACAAGAAGGTAAATCTATTGCTCTTGTCTCAGATGCGGGAACGCCACTGATCAGTGACCCAGGTTACCACTTAGTAAA
CCGCTGTCGTCAAGCAAATGTCAATGTTGTCCCATTACCTGGCGCTTGTGCTGTTATTACTGCATTGTCGGCTGCTGGTT
TACCTTCTGATCGATTTAGTTTTGAAGGTTTCTTGCCCCCGAAAAGTAAAGGTCGTCGAGATAAATTTGAAGAAATAGCA
CAAGCAGAACGTACGTGTATTTTTTATGAATCACCACATCGAATTATGGATTCATTAGACGACATGTTGACAGTACTTGG
TGCTGACCGACAGGTTGTCTTGGCTCGTGAATTAACAAAAAGATATGAAACCATTTATGGCGCACCACTGGGTGAGTTGA
TTGAATGGGTTAAAGAAGACGAAAATCGCAAGCGTGGAGAGATGGTTTTACTTATCCATGGCTTTAGAAGTGAAGCGAAA
GATGAACTGCCATTTGAAGCAACTCGCTCTGTTTCTATCCTTGTAAAAGAGCTTCCGCTTAAAAAAGCAGCGGCGATGGC
GGCTGAAATACACGGAGTGAAGAAAAATGCCCTATACAAATGGGGTTTAGAGCATTTAGATTAA

Upstream 100 bases:

>100_bases
TACTATGGATGCGAATCACCCGAACAGCTAAAATATTATTTTCATTATAGTGATGTCTACTTATATTCCCTATATTAATC
GCAGAAGAGATAGTAAACAA

Downstream 100 bases:

>100_bases
GAGAATCGAGAAAAAGGGTGGTAAGTTATAACTGACTCTTATATCATTCGCTTCAGGAGCTGACTCGGTAATCGCTGCTT
CATTCAAGTCCTTAGGGAAA

Product: tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTDHNLSVVEAATLYIVPTPIGNLGDITQRALDVLKSVDLIAAEDTRHTGRLLSHFGISSQTFALHDHNEQHKADLLISK
LQEGKSIALVSDAGTPLISDPGYHLVNRCRQANVNVVPLPGACAVITALSAAGLPSDRFSFEGFLPPKSKGRRDKFEEIA
QAERTCIFYESPHRIMDSLDDMLTVLGADRQVVLARELTKRYETIYGAPLGELIEWVKEDENRKRGEMVLLIHGFRSEAK
DELPFEATRSVSILVKELPLKKAAAMAAEIHGVKKNALYKWGLEHLD

Sequences:

>Translated_287_residues
MTDHNLSVVEAATLYIVPTPIGNLGDITQRALDVLKSVDLIAAEDTRHTGRLLSHFGISSQTFALHDHNEQHKADLLISK
LQEGKSIALVSDAGTPLISDPGYHLVNRCRQANVNVVPLPGACAVITALSAAGLPSDRFSFEGFLPPKSKGRRDKFEEIA
QAERTCIFYESPHRIMDSLDDMLTVLGADRQVVLARELTKRYETIYGAPLGELIEWVKEDENRKRGEMVLLIHGFRSEAK
DELPFEATRSVSILVKELPLKKAAAMAAEIHGVKKNALYKWGLEHLD
>Mature_286_residues
TDHNLSVVEAATLYIVPTPIGNLGDITQRALDVLKSVDLIAAEDTRHTGRLLSHFGISSQTFALHDHNEQHKADLLISKL
QEGKSIALVSDAGTPLISDPGYHLVNRCRQANVNVVPLPGACAVITALSAAGLPSDRFSFEGFLPPKSKGRRDKFEEIAQ
AERTCIFYESPHRIMDSLDDMLTVLGADRQVVLARELTKRYETIYGAPLGELIEWVKEDENRKRGEMVLLIHGFRSEAKD
ELPFEATRSVSILVKELPLKKAAAMAAEIHGVKKNALYKWGLEHLD

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=285, Percent_Identity=68.4210526315789, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31755; Mature: 31624

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHNLSVVEAATLYIVPTPIGNLGDITQRALDVLKSVDLIAAEDTRHTGRLLSHFGISS
CCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCC
QTFALHDHNEQHKADLLISKLQEGKSIALVSDAGTPLISDPGYHLVNRCRQANVNVVPLP
CEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECC
GACAVITALSAAGLPSDRFSFEGFLPPKSKGRRDKFEEIAQAERTCIFYESPHRIMDSLD
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCHHHHHHHHH
DMLTVLGADRQVVLARELTKRYETIYGAPLGELIEWVKEDENRKRGEMVLLIHGFRSEAK
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
DELPFEATRSVSILVKELPLKKAAAMAAEIHGVKKNALYKWGLEHLD
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDHNLSVVEAATLYIVPTPIGNLGDITQRALDVLKSVDLIAAEDTRHTGRLLSHFGISS
CCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCC
QTFALHDHNEQHKADLLISKLQEGKSIALVSDAGTPLISDPGYHLVNRCRQANVNVVPLP
CEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECC
GACAVITALSAAGLPSDRFSFEGFLPPKSKGRRDKFEEIAQAERTCIFYESPHRIMDSLD
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCHHHHHHHHH
DMLTVLGADRQVVLARELTKRYETIYGAPLGELIEWVKEDENRKRGEMVLLIHGFRSEAK
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
DELPFEATRSVSILVKELPLKKAAAMAAEIHGVKKNALYKWGLEHLD
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]