| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is coaE [H]
Identifier: 209696041
GI number: 209696041
Start: 2849518
End: 2850141
Strand: Direct
Name: coaE [H]
Synonym: VSAL_I2633
Alternate gene names: 209696041
Gene position: 2849518-2850141 (Clockwise)
Preceding gene: 209696040
Following gene: 209696042
Centisome position: 85.7
GC content: 36.06
Gene sequence:
>624_bases ATGAGTTATGTCATCGCTATTACGGGTGGTATAGGCAGTGGTAAAACGACAATTGCAGATAAATTTAACCAATTATATGA CATTGATATTGTTGATGCCGATATCATTGCTCGTGACGTTGTTAAACCGAAAACAAACGGATTACACCAAATCGAAGCGC ATTTTGGATCCTCGATTTTATTAAGTGATGGCAGTTTAAATCGTGCAGAGTTACGACAACGTATTTTTTCTGCTCCAAAA GAAAAAGAATGGCTAAATAATTTACTTCATCCTTTAATTCGCCAAGAGATGCAACATCAGATTACTCTGACTCAAGCGCC ATACGCTTTACTCGTTGTCCCTCTATTAGTTGAAAACAATCTACAAAACTTAGCAAATCGTATTCTCATTGTTGATGTTT CGGAGCAAACTCAAATTAATCGAACAATGAATCGTGATAGAGTAACTAATGAACAAGTTAATGCTATTCTTGCTTCTCAA GCAAGTCGAGAGCAACGTCTAGCGATTGCCGATGATGTCATTGATAATAACCAACAAAATGTAGACCTTAATAGCAAAAT TGCTCTTCTACATCAGAAATATCTGGTATTGTCTCAAGCCTCTAAGATAGAAGAAAAGAATTGA
Upstream 100 bases:
>100_bases TTCCATTTGGTCCTTATCTCGCGATTGCAGGTTGGATATGTTTATTGTGGGGCCAAGAAATTAGCCAATGGTACTTCACC TCAATTCTAGGGTTTCCCGT
Downstream 100 bases:
>100_bases TAACGACTATGAATGGACTTGGAATGCAAAAGTTTGAACATCCTTTAAATGAAAGGACTCGAATTTATTTACGTATAGAA TCTCTATTGCGTAAGCTTGG
Product: dephospho-CoA kinase (dephosphocoenzyme a kinase)
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSYVIAITGGIGSGKTTIADKFNQLYDIDIVDADIIARDVVKPKTNGLHQIEAHFGSSILLSDGSLNRAELRQRIFSAPK EKEWLNNLLHPLIRQEMQHQITLTQAPYALLVVPLLVENNLQNLANRILIVDVSEQTQINRTMNRDRVTNEQVNAILASQ ASREQRLAIADDVIDNNQQNVDLNSKIALLHQKYLVLSQASKIEEKN
Sequences:
>Translated_207_residues MSYVIAITGGIGSGKTTIADKFNQLYDIDIVDADIIARDVVKPKTNGLHQIEAHFGSSILLSDGSLNRAELRQRIFSAPK EKEWLNNLLHPLIRQEMQHQITLTQAPYALLVVPLLVENNLQNLANRILIVDVSEQTQINRTMNRDRVTNEQVNAILASQ ASREQRLAIADDVIDNNQQNVDLNSKIALLHQKYLVLSQASKIEEKN >Mature_206_residues SYVIAITGGIGSGKTTIADKFNQLYDIDIVDADIIARDVVKPKTNGLHQIEAHFGSSILLSDGSLNRAELRQRIFSAPKE KEWLNNLLHPLIRQEMQHQITLTQAPYALLVVPLLVENNLQNLANRILIVDVSEQTQINRTMNRDRVTNEQVNAILASQA SREQRLAIADDVIDNNQQNVDLNSKIALLHQKYLVLSQASKIEEKN
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI191252797, Length=193, Percent_Identity=31.0880829015544, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI191252795, Length=193, Percent_Identity=31.0880829015544, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI110227607, Length=167, Percent_Identity=28.1437125748503, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI110227605, Length=167, Percent_Identity=28.1437125748503, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI110227603, Length=167, Percent_Identity=28.1437125748503, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI110227601, Length=167, Percent_Identity=28.1437125748503, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI205277394, Length=167, Percent_Identity=28.1437125748503, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI1786292, Length=206, Percent_Identity=56.7961165048544, Blast_Score=222, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17554944, Length=189, Percent_Identity=29.6296296296296, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6320402, Length=191, Percent_Identity=37.696335078534, Blast_Score=117, Evalue=2e-27, Organism=Drosophila melanogaster, GI24644728, Length=179, Percent_Identity=31.2849162011173, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24658602, Length=191, Percent_Identity=25.6544502617801, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 23255; Mature: 23124
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS01294 COAE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVIAITGGIGSGKTTIADKFNQLYDIDIVDADIIARDVVKPKTNGLHQIEAHFGSSIL CCEEEEEECCCCCCCHHHHHHHHHEEEEEEECHHHHHHHHCCCCCCCHHHHHHHCCCEEE LSDGSLNRAELRQRIFSAPKEKEWLNNLLHPLIRQEMQHQITLTQAPYALLVVPLLVENN EECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCC LQNLANRILIVDVSEQTQINRTMNRDRVTNEQVNAILASQASREQRLAIADDVIDNNQQN HHHHHCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VDLNSKIALLHQKYLVLSQASKIEEKN CCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SYVIAITGGIGSGKTTIADKFNQLYDIDIVDADIIARDVVKPKTNGLHQIEAHFGSSIL CEEEEEECCCCCCCHHHHHHHHHEEEEEEECHHHHHHHHCCCCCCCHHHHHHHCCCEEE LSDGSLNRAELRQRIFSAPKEKEWLNNLLHPLIRQEMQHQITLTQAPYALLVVPLLVENN EECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCC LQNLANRILIVDVSEQTQINRTMNRDRVTNEQVNAILASQASREQRLAIADDVIDNNQQN HHHHHCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VDLNSKIALLHQKYLVLSQASKIEEKN CCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10024587; 10952301 [H]