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The map label for this gene is yacF [C]

Identifier: 209696042

GI number: 209696042

Start: 2850150

End: 2850896

Strand: Direct

Name: yacF [C]

Synonym: VSAL_I2634

Alternate gene names: 209696042

Gene position: 2850150-2850896 (Clockwise)

Preceding gene: 209696041

Following gene: 209696043

Centisome position: 85.71

GC content: 39.36

Gene sequence:

>747_bases
ATGAATGGACTTGGAATGCAAAAGTTTGAACATCCTTTAAATGAAAGGACTCGAATTTATTTACGTATAGAATCTCTATT
GCGTAAGCTTGGTCATTCTGCTGATTTAACACAACCTTACGAATACCAAGTGTTCTTTAGCTCTTTATTCCATATGTTGG
ATATTTTAGAGCAAGTTCAAGTCAAAGCCGATCTAGGTAAAGACTTAGAGAAACTGCGTTTACAATACCGTGCATGGATG
AATATTGAAGGCGTCGATCAATCTGCGCTTCTTTCCGTATTAGAACAAATAAGTCAAGTTCACCAAAACCTAATGCAAAC
GACTCGCCCAGGACATAGCCTAAAAGAAGATCGCTTTCTTTCTGCATTGAAGCAACGTTTCTTTATTCCTGGTGGCGATT
GCTGTTTCGATTTACCTGCACTTCATCATTGGCTACACCTCCCTCTTGATGTACGTTGTCGAAATACACACAACTGGATG
TCTCAATTACTCTCTCTGTCTGATGCTTTATCTCTATGGTTACGTTTAACCAGAGAAACCGCACGGTATACACCTCAGAT
TGCACGTAATGGATTTATGCAAAGCGAAATGGAAAATTCCAATTTACTTCGCTTAGAAATCCCGATTGACCAAGGTGTCT
ACCCAATGATCTCTGGGCATAAAAGTCGATTTGCGTTACGCTTTATGTCTTTTGAAACAAACAAGAATTGTGAAAAAGAC
ATCGAGTTTACCCTTGCTGTCTGCTGA

Upstream 100 bases:

>100_bases
AACAAAATGTAGACCTTAATAGCAAAATTGCTCTTCTACATCAGAAATATCTGGTATTGTCTCAAGCCTCTAAGATAGAA
GAAAAGAATTGATAACGACT

Downstream 100 bases:

>100_bases
GGAAATTATGTCACAACCGAACAGTCAACAACCAACGATCGTGAAATGTCCAACTTGCCAAAACAAAGTCGTTTGGAATA
CAGAAAGTGAATTTCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNGLGMQKFEHPLNERTRIYLRIESLLRKLGHSADLTQPYEYQVFFSSLFHMLDILEQVQVKADLGKDLEKLRLQYRAWM
NIEGVDQSALLSVLEQISQVHQNLMQTTRPGHSLKEDRFLSALKQRFFIPGGDCCFDLPALHHWLHLPLDVRCRNTHNWM
SQLLSLSDALSLWLRLTRETARYTPQIARNGFMQSEMENSNLLRLEIPIDQGVYPMISGHKSRFALRFMSFETNKNCEKD
IEFTLAVC

Sequences:

>Translated_248_residues
MNGLGMQKFEHPLNERTRIYLRIESLLRKLGHSADLTQPYEYQVFFSSLFHMLDILEQVQVKADLGKDLEKLRLQYRAWM
NIEGVDQSALLSVLEQISQVHQNLMQTTRPGHSLKEDRFLSALKQRFFIPGGDCCFDLPALHHWLHLPLDVRCRNTHNWM
SQLLSLSDALSLWLRLTRETARYTPQIARNGFMQSEMENSNLLRLEIPIDQGVYPMISGHKSRFALRFMSFETNKNCEKD
IEFTLAVC
>Mature_248_residues
MNGLGMQKFEHPLNERTRIYLRIESLLRKLGHSADLTQPYEYQVFFSSLFHMLDILEQVQVKADLGKDLEKLRLQYRAWM
NIEGVDQSALLSVLEQISQVHQNLMQTTRPGHSLKEDRFLSALKQRFFIPGGDCCFDLPALHHWLHLPLDVRCRNTHNWM
SQLLSLSDALSLWLRLTRETARYTPQIARNGFMQSEMENSNLLRLEIPIDQGVYPMISGHKSRFALRFMSFETNKNCEKD
IEFTLAVC

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=241, Percent_Identity=39.4190871369295, Blast_Score=190, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 28999; Mature: 28999

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLGMQKFEHPLNERTRIYLRIESLLRKLGHSADLTQPYEYQVFFSSLFHMLDILEQVQ
CCCCCCHHHHCCCCHHHEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VKADLGKDLEKLRLQYRAWMNIEGVDQSALLSVLEQISQVHQNLMQTTRPGHSLKEDRFL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
SALKQRFFIPGGDCCFDLPALHHWLHLPLDVRCRNTHNWMSQLLSLSDALSLWLRLTRET
HHHHHHHCCCCCCHHCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
ARYTPQIARNGFMQSEMENSNLLRLEIPIDQGVYPMISGHKSRFALRFMSFETNKNCEKD
HHCCHHHHHCCCHHHHCCCCCEEEEEECCCCCCCHHHCCCCHHHEEHEEECCCCCCCCCC
IEFTLAVC
CCEEEEEC
>Mature Secondary Structure
MNGLGMQKFEHPLNERTRIYLRIESLLRKLGHSADLTQPYEYQVFFSSLFHMLDILEQVQ
CCCCCCHHHHCCCCHHHEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VKADLGKDLEKLRLQYRAWMNIEGVDQSALLSVLEQISQVHQNLMQTTRPGHSLKEDRFL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
SALKQRFFIPGGDCCFDLPALHHWLHLPLDVRCRNTHNWMSQLLSLSDALSLWLRLTRET
HHHHHHHCCCCCCHHCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
ARYTPQIARNGFMQSEMENSNLLRLEIPIDQGVYPMISGHKSRFALRFMSFETNKNCEKD
HHCCHHHHHCCCHHHHCCCCCEEEEEECCCCCCCHHHCCCCHHHEEHEEECCCCCCCCCC
IEFTLAVC
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA