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The map label for this gene is pilA [H]

Identifier: 209696038

GI number: 209696038

Start: 2845150

End: 2845566

Strand: Direct

Name: pilA [H]

Synonym: VSAL_I2629

Alternate gene names: 209696038

Gene position: 2845150-2845566 (Clockwise)

Preceding gene: 209696037

Following gene: 209696039

Centisome position: 85.56

GC content: 38.61

Gene sequence:

>417_bases
ATGAACAAGCGTCAAGGACAGAAAGGCTTCACCTTAATTGAATTAATGATCGTAGTTGCCATCATTGGTGTGTTATCAGC
AATAGCTATTCCTGCTTATAAAGATTATGTTTCAAAAAGTGAGGCTGCGTCTGGGTTAGCAACAATTAAAGCACTGCAAA
CACCGGCAGAATTATTCTTTCAAGAAAGCGGTACTACTCAACCAACATTAGCTCAACTAGGAACAACTGCTAAAGCAAAT
ACCTTAGGGGTAATAACAGATCCTCTTGTTGATAGCGCTATTGTATTTACTTTCGGTTCAGACAGTGCTTTAAATGGCAA
AACATTAACACTAGCAAGAAATTCTGACACTGGTTGGTCTTGTACTCCATCTACAGGTGTTCCTGTTATGGATGGTTGCA
AAATAGTAACACCATAA

Upstream 100 bases:

>100_bases
CGAAGTGCCTATTTTTCCTTCTATTATATCTCCCCATTCGTTTTATTATTTCACGCATCAAATAAAACATAAATCAGCCT
GATTTATATTGGAGAAAGTA

Downstream 100 bases:

>100_bases
TAATGCACACCAACCTAGCTTCAATCTTGCGTCAAGCTGAACTCATCAGCTTGACGCAAGAAAATACCATTATCGAACAC
GTTCAATCAGGGGCACACAC

Product: type IV pilus subunit PilA

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MNKRQGQKGFTLIELMIVVAIIGVLSAIAIPAYKDYVSKSEAASGLATIKALQTPAELFFQESGTTQPTLAQLGTTAKAN
TLGVITDPLVDSAIVFTFGSDSALNGKTLTLARNSDTGWSCTPSTGVPVMDGCKIVTP

Sequences:

>Translated_138_residues
MNKRQGQKGFTLIELMIVVAIIGVLSAIAIPAYKDYVSKSEAASGLATIKALQTPAELFFQESGTTQPTLAQLGTTAKAN
TLGVITDPLVDSAIVFTFGSDSALNGKTLTLARNSDTGWSCTPSTGVPVMDGCKIVTP
>Mature_138_residues
MNKRQGQKGFTLIELMIVVAIIGVLSAIAIPAYKDYVSKSEAASGLATIKALQTPAELFFQESGTTQPTLAQLGTTAKAN
TLGVITDPLVDSAIVFTFGSDSALNGKTLTLARNSDTGWSCTPSTGVPVMDGCKIVTP

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

Organism=Escherichia coli, GI1786297, Length=58, Percent_Identity=50, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 14338; Mature: 14338

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRQGQKGFTLIELMIVVAIIGVLSAIAIPAYKDYVSKSEAASGLATIKALQTPAELFF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QESGTTQPTLAQLGTTAKANTLGVITDPLVDSAIVFTFGSDSALNGKTLTLARNSDTGWS
HCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCE
CTPSTGVPVMDGCKIVTP
ECCCCCCCCCCCCEEECC
>Mature Secondary Structure
MNKRQGQKGFTLIELMIVVAIIGVLSAIAIPAYKDYVSKSEAASGLATIKALQTPAELFF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QESGTTQPTLAQLGTTAKANTLGVITDPLVDSAIVFTFGSDSALNGKTLTLARNSDTGWS
HCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCE
CTPSTGVPVMDGCKIVTP
ECCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7905475 [H]