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The map label for this gene is ydiK [C]

Identifier: 209695990

GI number: 209695990

Start: 2768062

End: 2769147

Strand: Direct

Name: ydiK [C]

Synonym: VSAL_I2573

Alternate gene names: 209695990

Gene position: 2768062-2769147 (Clockwise)

Preceding gene: 209695989

Following gene: 209695991

Centisome position: 83.25

GC content: 37.66

Gene sequence:

>1086_bases
GTGTCTCATTTCAATAAACTAAATTCTAGTCATTGGGTTTTAGTCACCGCTTTACTTGTTGCAAGTTATGCGTGCTTTCT
ATTAATAGAACCCTATTTAAACCCGATCATTCTTGCCTTTATTATGTCTCTCTTATTTGCACCTTTACATAATAAAATTA
GCGAAAAACTACCAAAAAGCCCAAATAGTGCGGCTATTTTATCTTGTACCGCGTTAACTTTTATTATCGCTATTCCCCTC
TTTTTTGTCTTTGTTGCCATTGTTCAGCAAGGGGCTACTTTTTCTAAAGACGCTTATCATTGGATAACCGAAGGCGGCAT
TCAAACTTTATTTCAACACCCTATTGTCTCTCAAATATTGGCTTTTATTAATAAACACTTGCCTTTTGATGCCATAGATC
CAAATGAAATCACACAAAAAGTAGCGCAATTAGCTTCTCAAGTTGGAACTAAAGTTGTCGGTGTTAGTGCTCAGATCCTT
GGCGATGCAACGAATGTCTTAGTAAATTTCTTCTTAATGCTATTTGTTCTGTTCTTCCTACTGCGCGATCAAGATAAAAT
AATCTCGGCATTTCGTCATGTACTTCCTCTTTCTAGAAGCCAAGAAGACCGTTTACTTGATGAAATTGAAGAAGTATCAA
AATCCGCTATTCTTGGTTCGTTTTTGACCGCAATAGCACAAGGTCTTGCTGGTGGCTTTGCTATGTGGCTAGCTGGCTTC
CCAGGTTTATTCTGGGGAACGATGATGGGATTTGCCTCATTTATTCCAGTCGTAGGAACCGCACTTATTTGGATTCCGGC
AACCATTTATTTACTGCTAACCAATCAATGGGAATGGGCGATTTTCTTAACCGTTTGGGGAGTACTTGTTGTTGGTTCAA
TTGATAACATTGTGCGACCATTATTAATGCAAGGAAATTCAGGAATGAACACTCTGCTTATTTTCTTCTCACTATTAGGC
GGCATTCATTTATATGGTTTAATCGGTTTAATCTATGGCCCATTGATTTTCGCACTGACTTTTGTTCTATTTAATATGTA
CGAAACTGAATTCAAAGGCTTCTTAGACCAGCAAGATAAGAACTAA

Upstream 100 bases:

>100_bases
ATCGTTACTCTCCATTATTCTTGCTAAGATTAACAAGTATCTATATAACTTAACTTACATTCATCATTTATAAATCGCTA
CCGCATCATAAGGGAATAAT

Downstream 100 bases:

>100_bases
CGCCCTCAAAGCAACCACATTAAGGCTGTATTACCTAGCTAAGGTTAAACAGCCTCTTACTTTTCTTTTCCTTACCCTTC
CTTTGTGGGACAATCTCGCC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MSHFNKLNSSHWVLVTALLVASYACFLLIEPYLNPIILAFIMSLLFAPLHNKISEKLPKSPNSAAILSCTALTFIIAIPL
FFVFVAIVQQGATFSKDAYHWITEGGIQTLFQHPIVSQILAFINKHLPFDAIDPNEITQKVAQLASQVGTKVVGVSAQIL
GDATNVLVNFFLMLFVLFFLLRDQDKIISAFRHVLPLSRSQEDRLLDEIEEVSKSAILGSFLTAIAQGLAGGFAMWLAGF
PGLFWGTMMGFASFIPVVGTALIWIPATIYLLLTNQWEWAIFLTVWGVLVVGSIDNIVRPLLMQGNSGMNTLLIFFSLLG
GIHLYGLIGLIYGPLIFALTFVLFNMYETEFKGFLDQQDKN

Sequences:

>Translated_361_residues
MSHFNKLNSSHWVLVTALLVASYACFLLIEPYLNPIILAFIMSLLFAPLHNKISEKLPKSPNSAAILSCTALTFIIAIPL
FFVFVAIVQQGATFSKDAYHWITEGGIQTLFQHPIVSQILAFINKHLPFDAIDPNEITQKVAQLASQVGTKVVGVSAQIL
GDATNVLVNFFLMLFVLFFLLRDQDKIISAFRHVLPLSRSQEDRLLDEIEEVSKSAILGSFLTAIAQGLAGGFAMWLAGF
PGLFWGTMMGFASFIPVVGTALIWIPATIYLLLTNQWEWAIFLTVWGVLVVGSIDNIVRPLLMQGNSGMNTLLIFFSLLG
GIHLYGLIGLIYGPLIFALTFVLFNMYETEFKGFLDQQDKN
>Mature_360_residues
SHFNKLNSSHWVLVTALLVASYACFLLIEPYLNPIILAFIMSLLFAPLHNKISEKLPKSPNSAAILSCTALTFIIAIPLF
FVFVAIVQQGATFSKDAYHWITEGGIQTLFQHPIVSQILAFINKHLPFDAIDPNEITQKVAQLASQVGTKVVGVSAQILG
DATNVLVNFFLMLFVLFFLLRDQDKIISAFRHVLPLSRSQEDRLLDEIEEVSKSAILGSFLTAIAQGLAGGFAMWLAGFP
GLFWGTMMGFASFIPVVGTALIWIPATIYLLLTNQWEWAIFLTVWGVLVVGSIDNIVRPLLMQGNSGMNTLLIFFSLLGG
IHLYGLIGLIYGPLIFALTFVLFNMYETEFKGFLDQQDKN

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=224, Percent_Identity=28.125, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39999; Mature: 39868

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFNKLNSSHWVLVTALLVASYACFLLIEPYLNPIILAFIMSLLFAPLHNKISEKLPKS
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PNSAAILSCTALTFIIAIPLFFVFVAIVQQGATFSKDAYHWITEGGIQTLFQHPIVSQIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFINKHLPFDAIDPNEITQKVAQLASQVGTKVVGVSAQILGDATNVLVNFFLMLFVLFFL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRDQDKIISAFRHVLPLSRSQEDRLLDEIEEVSKSAILGSFLTAIAQGLAGGFAMWLAGF
HCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGLFWGTMMGFASFIPVVGTALIWIPATIYLLLTNQWEWAIFLTVWGVLVVGSIDNIVRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLMQGNSGMNTLLIFFSLLGGIHLYGLIGLIYGPLIFALTFVLFNMYETEFKGFLDQQDK
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
N
C
>Mature Secondary Structure 
SHFNKLNSSHWVLVTALLVASYACFLLIEPYLNPIILAFIMSLLFAPLHNKISEKLPKS
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PNSAAILSCTALTFIIAIPLFFVFVAIVQQGATFSKDAYHWITEGGIQTLFQHPIVSQIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFINKHLPFDAIDPNEITQKVAQLASQVGTKVVGVSAQILGDATNVLVNFFLMLFVLFFL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRDQDKIISAFRHVLPLSRSQEDRLLDEIEEVSKSAILGSFLTAIAQGLAGGFAMWLAGF
HCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGLFWGTMMGFASFIPVVGTALIWIPATIYLLLTNQWEWAIFLTVWGVLVVGSIDNIVRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLMQGNSGMNTLLIFFSLLGGIHLYGLIGLIYGPLIFALTFVLFNMYETEFKGFLDQQDK
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]