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The map label for this gene is rsmC [H]

Identifier: 209695991

GI number: 209695991

Start: 2769232

End: 2770293

Strand: Direct

Name: rsmC [H]

Synonym: VSAL_I2574

Alternate gene names: 209695991

Gene position: 2769232-2770293 (Clockwise)

Preceding gene: 209695990

Following gene: 209695992

Centisome position: 83.28

GC content: 37.48

Gene sequence:

>1062_bases
GTGGGACAATCTCGCCAGTTTTTGTATTCTTTCGAGGCCATTATGTCTTACTCTGCTCCAAGTCAAATAACTCAGCGTCA
ACTTGCCTATTTTGAAGGTAAACACGTACTCATTGCTGGTGAGCTTAATGATAATTTCCCTCTTGAGCTAGATAAGCATT
GTGCTTCTACATCTATCTTTACGACCAATTATGGTTACTACAAACAATTTTCAGAAAACCCAAAAATTAACTGTTATTTC
GGAACCGAATTAATAGAAGAAAGCCATGCAGACATGATTTTACTGTATTGGCCAAAAGCAAAAGCTGAAGCTGAGTACTT
ACTCACTATGCTATTAGCCAAACTAGGAAAAGACACCGAGATCATCGTTGTTGGTGAAAACCGCAGCGGAGTAAAAAGCG
TAGAGAAAATGTTCGCGAATTTTGGACCAATGAACAAACTGGATTCAGCTCGACGTTGCAGCTTTTATTGGGGTCAATGT
ACAGAAACGGCGCCAAGCTTTAACTTACAAGATTGGTTTAAAGAATATCAAGTTCAATTTAAAGAACACACGATTGAAGT
AAGAAGCTTACCTGGTGTATTTAGCCATGGTGAATTTGATAAAGGTTCAGAGTTACTGCTTCAAACTCTGCCAAGTTTAC
GTGGTCATGTTTTAGATTTTGGTTGTGGTGCCGGCGTGTTAGGTTCTGTAATGAAAACCATTAATCCGAAAATCCACTTA
GATATGGTTGATATTAGTGCGTTCGCAATTGCTTCTTCCATTGAGACATTAAAAGCCAATGGATTAGAAGGGAATGTATT
TGCAAGTGACGTATATTCTGACACGAAACAAAACTACCAATTTATCGTCAGCAATCCACCTTTTCATGCTGGGCTAAAAA
CACATTATTCTTCAACCGAAGAGTTGCTTCAAAAAGCACCGCAAAATTTAACTCATAGCGGTCAAATGATTTTTGTCGCT
AATAGCTTTCTACAATATCCACCAATTGTTGAAAAAGTATTTGGTCATTGCAACACATTAGCAAAGAATAATAAATTCAG
AATTTATTCCGCACAAAAGTAA

Upstream 100 bases:

>100_bases
GCAAGATAAGAACTAACGCCCTCAAAGCAACCACATTAAGGCTGTATTACCTAGCTAAGGTTAAACAGCCTCTTACTTTT
CTTTTCCTTACCCTTCCTTT

Downstream 100 bases:

>100_bases
TTATCGTATACCGCCGCACTTTGAGACTCTGTTGCTTGATTTTTAACGTAATTTACGTATAAGAGGCAGCAGAGTTCCTC
GTTATTAATAAACTTCATAT

Product: ribosomal RNA small subunit methyltransferase C (16S rRNA m2G120 methyltransferase)

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MGQSRQFLYSFEAIMSYSAPSQITQRQLAYFEGKHVLIAGELNDNFPLELDKHCASTSIFTTNYGYYKQFSENPKINCYF
GTELIEESHADMILLYWPKAKAEAEYLLTMLLAKLGKDTEIIVVGENRSGVKSVEKMFANFGPMNKLDSARRCSFYWGQC
TETAPSFNLQDWFKEYQVQFKEHTIEVRSLPGVFSHGEFDKGSELLLQTLPSLRGHVLDFGCGAGVLGSVMKTINPKIHL
DMVDISAFAIASSIETLKANGLEGNVFASDVYSDTKQNYQFIVSNPPFHAGLKTHYSSTEELLQKAPQNLTHSGQMIFVA
NSFLQYPPIVEKVFGHCNTLAKNNKFRIYSAQK

Sequences:

>Translated_353_residues
MGQSRQFLYSFEAIMSYSAPSQITQRQLAYFEGKHVLIAGELNDNFPLELDKHCASTSIFTTNYGYYKQFSENPKINCYF
GTELIEESHADMILLYWPKAKAEAEYLLTMLLAKLGKDTEIIVVGENRSGVKSVEKMFANFGPMNKLDSARRCSFYWGQC
TETAPSFNLQDWFKEYQVQFKEHTIEVRSLPGVFSHGEFDKGSELLLQTLPSLRGHVLDFGCGAGVLGSVMKTINPKIHL
DMVDISAFAIASSIETLKANGLEGNVFASDVYSDTKQNYQFIVSNPPFHAGLKTHYSSTEELLQKAPQNLTHSGQMIFVA
NSFLQYPPIVEKVFGHCNTLAKNNKFRIYSAQK
>Mature_352_residues
GQSRQFLYSFEAIMSYSAPSQITQRQLAYFEGKHVLIAGELNDNFPLELDKHCASTSIFTTNYGYYKQFSENPKINCYFG
TELIEESHADMILLYWPKAKAEAEYLLTMLLAKLGKDTEIIVVGENRSGVKSVEKMFANFGPMNKLDSARRCSFYWGQCT
ETAPSFNLQDWFKEYQVQFKEHTIEVRSLPGVFSHGEFDKGSELLLQTLPSLRGHVLDFGCGAGVLGSVMKTINPKIHLD
MVDISAFAIASSIETLKANGLEGNVFASDVYSDTKQNYQFIVSNPPFHAGLKTHYSSTEELLQKAPQNLTHSGQMIFVAN
SFLQYPPIVEKVFGHCNTLAKNNKFRIYSAQK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=339, Percent_Identity=40.7079646017699, Blast_Score=268, Evalue=4e-73,
Organism=Escherichia coli, GI87082206, Length=269, Percent_Identity=28.996282527881, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 39787; Mature: 39655

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQSRQFLYSFEAIMSYSAPSQITQRQLAYFEGKHVLIAGELNDNFPLELDKHCASTSIF
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCEEE
TTNYGYYKQFSENPKINCYFGTELIEESHADMILLYWPKAKAEAEYLLTMLLAKLGKDTE
EECCCHHHHHCCCCCEEEEECHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCE
IIVVGENRSGVKSVEKMFANFGPMNKLDSARRCSFYWGQCTETAPSFNLQDWFKEYQVQF
EEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHCEEEECCCCCCCCCCCHHHHHHHHHHHH
KEHTIEVRSLPGVFSHGEFDKGSELLLQTLPSLRGHVLDFGCGAGVLGSVMKTINPKIHL
HHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHCCCEEEE
DMVDISAFAIASSIETLKANGLEGNVFASDVYSDTKQNYQFIVSNPPFHAGLKTHYSSTE
EEEHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCEEEECCCCCCCCHHHHCCCHH
ELLQKAPQNLTHSGQMIFVANSFLQYPPIVEKVFGHCNTLAKNNKFRIYSAQK
HHHHHCCCCCCCCCCEEEEECCHHCCCHHHHHHHHHHHHHCCCCEEEEEECCC
>Mature Secondary Structure 
GQSRQFLYSFEAIMSYSAPSQITQRQLAYFEGKHVLIAGELNDNFPLELDKHCASTSIF
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCEEE
TTNYGYYKQFSENPKINCYFGTELIEESHADMILLYWPKAKAEAEYLLTMLLAKLGKDTE
EECCCHHHHHCCCCCEEEEECHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCE
IIVVGENRSGVKSVEKMFANFGPMNKLDSARRCSFYWGQCTETAPSFNLQDWFKEYQVQF
EEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHCEEEECCCCCCCCCCCHHHHHHHHHHHH
KEHTIEVRSLPGVFSHGEFDKGSELLLQTLPSLRGHVLDFGCGAGVLGSVMKTINPKIHL
HHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHCCCEEEE
DMVDISAFAIASSIETLKANGLEGNVFASDVYSDTKQNYQFIVSNPPFHAGLKTHYSSTE
EEEHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCEEEECCCCCCCCHHHHCCCHH
ELLQKAPQNLTHSGQMIFVANSFLQYPPIVEKVFGHCNTLAKNNKFRIYSAQK
HHHHHCCCCCCCCCCEEEEECCHHCCCHHHHHHHHHHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA