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The map label for this gene is yadS [C]

Identifier: 209695984

GI number: 209695984

Start: 2759421

End: 2760032

Strand: Direct

Name: yadS [C]

Synonym: VSAL_I2567

Alternate gene names: 209695984

Gene position: 2759421-2760032 (Clockwise)

Preceding gene: 209695983

Following gene: 209695985

Centisome position: 82.99

GC content: 41.99

Gene sequence:

>612_bases
ATGTTAATCTATACAATTGATATGTTCGGTACCGCCATTTTTGCAATTTCAGGAGTGTTATTAGCTGGGCGGTTAAAAAT
GGACCCTTTTGGGGTTACCGTTTTGGCAAGTGTTACCGCTATTGGTGGTGGTACGATTCGTGATATGGCTCTAGGTGCAA
CCCCCGTTTTCTGGATTACCGACACAAATTATTTGTTGGTCATTTTTATTACTTGTATCTTAACTATGCTTATCATTAGA
AAACCAAAGCGACTTCCTTGGTATGTTTTACCAGTATCGGATGCGATTGGTCTCGCCGTTTTTGTCGGTATTGGTGTAGA
AAAAGCACTTAAATATAATGCAGATCCCATGGTCGCAGTTATTATGGGCGTTATTACCGGTTGTGGTGGTGGGATTATTC
GCGATGTTCTTGCCCGTGAAGTTCCGATGGTATTGAGGAGCGAAGTTTATGCCACCGCTTGTATCTTAGGTGGAATAGTT
CATACCTCAGCCTTAGAGTTTAATGTTCCCTCATCCACCGCAATGCTATGTGGTGTTGCGACAACTCTTGTTATTCGTCT
AGCCGCTATTCGTTGGCATTTATCTTTACCTACCTTTGCGCTAAACAAATAA

Upstream 100 bases:

>100_bases
CGCCATTTGGATAATTCTTCAAAGCGTCATCATGGTTATGCTTAAACAAGGGCTATAACCTTACTTCAACAACATCATGC
AGTAAGTCATAGAGGACAAG

Downstream 100 bases:

>100_bases
TCAATCCCTAGATAGGCAGTATGTTTGCTGCCTATCTATTCTATTCATGATTAAGCCTGTTTATTTATTGAACTTTTATT
AAAAAAAGGTGACCAAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLIYTIDMFGTAIFAISGVLLAGRLKMDPFGVTVLASVTAIGGGTIRDMALGATPVFWITDTNYLLVIFITCILTMLIIR
KPKRLPWYVLPVSDAIGLAVFVGIGVEKALKYNADPMVAVIMGVITGCGGGIIRDVLAREVPMVLRSEVYATACILGGIV
HTSALEFNVPSSTAMLCGVATTLVIRLAAIRWHLSLPTFALNK

Sequences:

>Translated_203_residues
MLIYTIDMFGTAIFAISGVLLAGRLKMDPFGVTVLASVTAIGGGTIRDMALGATPVFWITDTNYLLVIFITCILTMLIIR
KPKRLPWYVLPVSDAIGLAVFVGIGVEKALKYNADPMVAVIMGVITGCGGGIIRDVLAREVPMVLRSEVYATACILGGIV
HTSALEFNVPSSTAMLCGVATTLVIRLAAIRWHLSLPTFALNK
>Mature_203_residues
MLIYTIDMFGTAIFAISGVLLAGRLKMDPFGVTVLASVTAIGGGTIRDMALGATPVFWITDTNYLLVIFITCILTMLIIR
KPKRLPWYVLPVSDAIGLAVFVGIGVEKALKYNADPMVAVIMGVITGCGGGIIRDVLAREVPMVLRSEVYATACILGGIV
HTSALEFNVPSSTAMLCGVATTLVIRLAAIRWHLSLPTFALNK

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=204, Percent_Identity=65.6862745098039, Blast_Score=248, Evalue=2e-67,
Organism=Escherichia coli, GI87082304, Length=153, Percent_Identity=37.9084967320261, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21643; Mature: 21643

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIYTIDMFGTAIFAISGVLLAGRLKMDPFGVTVLASVTAIGGGTIRDMALGATPVFWIT
CEEEEEHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHCCCCCHHHHHCCCCEEEEEE
DTNYLLVIFITCILTMLIIRKPKRLPWYVLPVSDAIGLAVFVGIGVEKALKYNADPMVAV
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCHHHHHHCCCCHHHHH
IMGVITGCGGGIIRDVLAREVPMVLRSEVYATACILGGIVHTSALEFNVPSSTAMLCGVA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHH
TTLVIRLAAIRWHLSLPTFALNK
HHHHHHHHHHHHEECCCEEECCC
>Mature Secondary Structure
MLIYTIDMFGTAIFAISGVLLAGRLKMDPFGVTVLASVTAIGGGTIRDMALGATPVFWIT
CEEEEEHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHCCCCCHHHHHCCCCEEEEEE
DTNYLLVIFITCILTMLIIRKPKRLPWYVLPVSDAIGLAVFVGIGVEKALKYNADPMVAV
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCHHHHHHCCCCHHHHH
IMGVITGCGGGIIRDVLAREVPMVLRSEVYATACILGGIVHTSALEFNVPSSTAMLCGVA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHH
TTLVIRLAAIRWHLSLPTFALNK
HHHHHHHHHHHHEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301; 1741267 [H]