Click here to switch to the map view.

The map label for this gene is 209695977

Identifier: 209695977

GI number: 209695977

Start: 2740940

End: 2741386

Strand: Reverse

Name: 209695977

Synonym: VSAL_I2559

Alternate gene names: NA

Gene position: 2741386-2740940 (Counterclockwise)

Preceding gene: 209695978

Following gene: 209695975

Centisome position: 82.44

GC content: 37.81

Gene sequence:

>447_bases
ATGAAAAGAATAATGATAGTAACCGCAGTCATAATCGGACTTGCTGGTTGTCAGATGACTTCTGAAGACAACATCGATTG
GCAACAAGATAACCAAGTTGAGTTAATGAATTCAAAAATAGAATTAAACTCAGCGGTTTGGATTGACGAAATGCCAAGTG
TTGGCAGTGAAGAAGATGAAAGTAAGCTGAATTTAGCACTGACACTGACTTCAAATCAGGTTATAGACCCTGATATTGAG
ATCGTCGAGGTGGTTATTCGTCAAGGTGAAGAGTCGTGGGTGATTGATGAAGAAGAATATGATGTGCGCGTTCATAACAA
TCATTCTTGGGAAATAGCAGCGAAATCATTTCATGTATTGGATGCAAGTAAGCCGCTGGATATTGCTGTTCAAGTTAATG
ATGAATGGATAATTCAAACTAATGTTTCGGTTGATACTGTGTATTAA

Upstream 100 bases:

>100_bases
GAATATTGATGATTGGGTTGAAGAAATTAAAAATGAATATGAAAATGATATTCAAGTACTAAAAAGTTGGTTAAAGCAGC
GACAAAATTAAGGAACTATA

Downstream 100 bases:

>100_bases
TTTAATACCGGATACAAAAATGCCCCGTCTATCTAAATAGAGCGGGGCATTTTTATTTCAGAAAGAGTTAACTATTATAA
CTCTTCTAGATCACCACAAA

Product: lipoprotein

Products: NA

Alternate protein names: DNA Polymerase III Beta Chain

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKRIMIVTAVIIGLAGCQMTSEDNIDWQQDNQVELMNSKIELNSAVWIDEMPSVGSEEDESKLNLALTLTSNQVIDPDIE
IVEVVIRQGEESWVIDEEEYDVRVHNNHSWEIAAKSFHVLDASKPLDIAVQVNDEWIIQTNVSVDTVY

Sequences:

>Translated_148_residues
MKRIMIVTAVIIGLAGCQMTSEDNIDWQQDNQVELMNSKIELNSAVWIDEMPSVGSEEDESKLNLALTLTSNQVIDPDIE
IVEVVIRQGEESWVIDEEEYDVRVHNNHSWEIAAKSFHVLDASKPLDIAVQVNDEWIIQTNVSVDTVY
>Mature_148_residues
MKRIMIVTAVIIGLAGCQMTSEDNIDWQQDNQVELMNSKIELNSAVWIDEMPSVGSEEDESKLNLALTLTSNQVIDPDIE
IVEVVIRQGEESWVIDEEEYDVRVHNNHSWEIAAKSFHVLDASKPLDIAVQVNDEWIIQTNVSVDTVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16784; Mature: 16784

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIMIVTAVIIGLAGCQMTSEDNIDWQQDNQVELMNSKIELNSAVWIDEMPSVGSEEDE
CCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEECEEEEEECCCCCCCCCCC
SKLNLALTLTSNQVIDPDIEIVEVVIRQGEESWVIDEEEYDVRVHNNHSWEIAAKSFHVL
CEEEEEEEEECCCEECCCHHHHHHHHHCCCCCEEECCCCEEEEEECCCCEEEEEEEEEEE
DASKPLDIAVQVNDEWIIQTNVSVDTVY
ECCCCEEEEEEECCCEEEEECCEEEEEC
>Mature Secondary Structure
MKRIMIVTAVIIGLAGCQMTSEDNIDWQQDNQVELMNSKIELNSAVWIDEMPSVGSEEDE
CCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEECEEEEEECCCCCCCCCCC
SKLNLALTLTSNQVIDPDIEIVEVVIRQGEESWVIDEEEYDVRVHNNHSWEIAAKSFHVL
CEEEEEEEEECCCEECCCHHHHHHHHHCCCCCEEECCCCEEEEEECCCCEEEEEEEEEEE
DASKPLDIAVQVNDEWIIQTNVSVDTVY
ECCCCEEEEEEECCCEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA