| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is grxA [H]
Identifier: 209695480
GI number: 209695480
Start: 2176977
End: 2177240
Strand: Reverse
Name: grxA [H]
Synonym: VSAL_I2030
Alternate gene names: 209695480
Gene position: 2177240-2176977 (Counterclockwise)
Preceding gene: 209695481
Following gene: 209695479
Centisome position: 65.48
GC content: 38.64
Gene sequence:
>264_bases ATGTTTGTTGTTATTTTTGGTCGCCCTGGTTGTCCATTCTGTGTTCGCGCTAAAGAACATGCAGAAACACTAAAAGCAAA ACGCGAAGACTTTAACTATCGCTACGTTGATATTCACGCAGAAGGTATTTCAAAAGCAGACCTAGAAAAAACAGTGGGTA AGCCAGTTGATACTGTTCCACAAATTTTTATCGACCAAGATCACATTGGCGGTTGCACAGAATTTGAAGCGTATGCTAAA GAAAACTTAGGTCTTTTTGATTAA
Upstream 100 bases:
>100_bases CCAAAGAGGTAAAACCATCTTTACTTTGTTCATATCAACAGGCATAGTATAGATATTGAGTGCAAGTATTACGCATCTTA TTATTAATTTGGAGAAAGCT
Downstream 100 bases:
>100_bases TCTATAGCCTGTGCCGATGTATTTAAAATCACTGCTCTTTAGCAGTGATTTTTTTTCATTTTATTTATAAATATGGTTAT ACATTCGCCATTTTTAAGTT
Product: glutaredoxin 1
Products: deoxyribonucleotides [C]
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MFVVIFGRPGCPFCVRAKEHAETLKAKREDFNYRYVDIHAEGISKADLEKTVGKPVDTVPQIFIDQDHIGGCTEFEAYAK ENLGLFD
Sequences:
>Translated_87_residues MFVVIFGRPGCPFCVRAKEHAETLKAKREDFNYRYVDIHAEGISKADLEKTVGKPVDTVPQIFIDQDHIGGCTEFEAYAK ENLGLFD >Mature_87_residues MFVVIFGRPGCPFCVRAKEHAETLKAKREDFNYRYVDIHAEGISKADLEKTVGKPVDTVPQIFIDQDHIGGCTEFEAYAK ENLGLFD
Specific function: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins [H]
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1787073, Length=83, Percent_Identity=66.2650602409639, Blast_Score=122, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011902 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 9837; Mature: 9837
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVVIFGRPGCPFCVRAKEHAETLKAKREDFNYRYVDIHAEGISKADLEKTVGKPVDTVP CEEEEECCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCC QIFIDQDHIGGCTEFEAYAKENLGLFD EEEECCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MFVVIFGRPGCPFCVRAKEHAETLKAKREDFNYRYVDIHAEGISKADLEKTVGKPVDTVP CEEEEECCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCC QIFIDQDHIGGCTEFEAYAKENLGLFD EEEECCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ribonucleotides [C]
Specific reaction: ribonucleotides = deoxyribonucleotides [C]
General reaction: deoxyribonucleotide biosynthesis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]