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The map label for this gene is ybjL [C]

Identifier: 209695479

GI number: 209695479

Start: 2175149

End: 2176831

Strand: Reverse

Name: ybjL [C]

Synonym: VSAL_I2029

Alternate gene names: 209695479

Gene position: 2176831-2175149 (Counterclockwise)

Preceding gene: 209695480

Following gene: 209695477

Centisome position: 65.47

GC content: 41.0

Gene sequence:

>1683_bases
GTGAACATTGATGTTGCGACCTTGTTATCGCAAAACGATATCTTACTTTTATTCGTTGTTCTCGCTCTAGGCTTATTTAT
AGCTAAAGTTAAAATCGGTAGCTTCCAATTAGGCAGTTCTATCGGTGTTCTTATCACTGCCCTCTTTATGGGTAGTCTCG
GATATACCTTCACCGCAGATTCACTCAATATTGGCTTTATGCTATTTATTTTTTGTGTTGGTATTGAGGCTGGTCCAAAC
TTCTTCGGTATTTTCCTTCGTGATGGTAAGCACTACTTATTACTTGTATTAGTCGTGTTAATTTCAGCAATTTCCCTTAG
TTTCTTGACTGGTTATTACTTTAATCTCGATTATGGCCTATCGACAGGAATGATGGCTGGAGCATTAACAGCAACGCCGG
TATTGGTTGGTGCAAAAGATGCCTTAAATTCTGGTTTAGCCGTACTCCCTGAAGGTGTTGATTTCAGTAAAGTAATGGAT
AATCTCAGTGTCGGTTATGCCTTCTCGTATTTGATTGGCTTAACCAGCTTAATTTTATTGGCTCGATTACTACCACAATT
GCAGAAGCAAAACCTACAAGACAGTGCGATGCAAATAGCTCAAGAACGTGGGATCGGTAGCGCAGGACAAAGAAAAGTCT
ATTTACCAATCATTCGAGCATATCGTGTAGGCCAAGAGCTTATTGACTGGACTGATGGAAAAAACTTACGTGAACTTGGC
ATCCACCGTCAAACTGGTTGTCATATCGAGCGTATTCGTCGTAACGGTATTCTGGCGAATCCAGATGGTGATTATATCCT
ACAACAAGGAGATGAAATTGCGCTTGTGGGTTACCCTGATAGCCATGCTCGTCTTGATTCAAGCTTTAGAAACGGTAAAG
AAGTATTTGACCGTAACTTGCTTGATTTACGTATTGCCGAGGAAGAGATTGTTGTAAAAAATGACAACATCGCAGGCAAA
CGTTTATCCGAATTAAACTTATCTGAATATGGCTGCTTCTTGAACCGTGTAGTACGAGCTCAAATTGAAATGCCAATTGA
ACACGATATTGTTTTAGCGAAAGGAGACATCCTTCAAGTCAGTGGCGAGAAAAGCAAGGTTCACCATATTGCGGATAAAA
TTGGTTTCATCTCAATCCACAGTCAGGTATCCGATTTATTAGCTTTCTGTAGCTTCTTTATTCTTGGCATTATGTTTGGC
ATGATCACGATGAGCTTTGGCCAAGTAACCTTTGGACTAGGCAACGCAGTCGGCTTATTGATCTCAGGCATCACCTTAGG
CTTTTTAAGAGCCAACCACCCAACCTTTGGTTACGTGCCTCAAGGCGCACTTAATATGACCAAAAACCTAGGGCTTTTAG
TCTTTATGGTAGGAATTGGACTGAGTGCCGGTGGCAACATTATTGAATATTTCTCGGAAGATGGTCTTAAAGTATTAGCC
GCTGCACTTATTGTAAGTGTGATTCCGGTGATCCTTGCTTATCTTGTTGGTGCTTATATTTTAAAAATGAACCGTGCACT
ATTAATCGGAGCGATTATTGGCGCTCGAACTTGTGGTCCTGCGATGGATGTAGTGAATGAACATGCCCGCAGTACGATTC
CTGCACTTGGTTATGCTGGTACTTATGCTATTGCCAATATCTTAATGACCGTTGCTGGTACTATTATGATTTTGTTAGCC
TAA

Upstream 100 bases:

>100_bases
TGATTTTTTTTCATTTTATTTATAAATATGGTTATACATTCGCCATTTTTAAGTTAGACTTGCATCACACTTTCCCCTTC
CATATTTCAGGCAAAATACA

Downstream 100 bases:

>100_bases
ATTAGCTTATCTTTCATTTGCTTCTGCTTTAAATGAGAAGTAATAAAAAACCCCAGAATGATAATTCACTCTGGGGTTTT
ATTTTGTCTTCTATTTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MNIDVATLLSQNDILLLFVVLALGLFIAKVKIGSFQLGSSIGVLITALFMGSLGYTFTADSLNIGFMLFIFCVGIEAGPN
FFGIFLRDGKHYLLLVLVVLISAISLSFLTGYYFNLDYGLSTGMMAGALTATPVLVGAKDALNSGLAVLPEGVDFSKVMD
NLSVGYAFSYLIGLTSLILLARLLPQLQKQNLQDSAMQIAQERGIGSAGQRKVYLPIIRAYRVGQELIDWTDGKNLRELG
IHRQTGCHIERIRRNGILANPDGDYILQQGDEIALVGYPDSHARLDSSFRNGKEVFDRNLLDLRIAEEEIVVKNDNIAGK
RLSELNLSEYGCFLNRVVRAQIEMPIEHDIVLAKGDILQVSGEKSKVHHIADKIGFISIHSQVSDLLAFCSFFILGIMFG
MITMSFGQVTFGLGNAVGLLISGITLGFLRANHPTFGYVPQGALNMTKNLGLLVFMVGIGLSAGGNIIEYFSEDGLKVLA
AALIVSVIPVILAYLVGAYILKMNRALLIGAIIGARTCGPAMDVVNEHARSTIPALGYAGTYAIANILMTVAGTIMILLA

Sequences:

>Translated_560_residues
MNIDVATLLSQNDILLLFVVLALGLFIAKVKIGSFQLGSSIGVLITALFMGSLGYTFTADSLNIGFMLFIFCVGIEAGPN
FFGIFLRDGKHYLLLVLVVLISAISLSFLTGYYFNLDYGLSTGMMAGALTATPVLVGAKDALNSGLAVLPEGVDFSKVMD
NLSVGYAFSYLIGLTSLILLARLLPQLQKQNLQDSAMQIAQERGIGSAGQRKVYLPIIRAYRVGQELIDWTDGKNLRELG
IHRQTGCHIERIRRNGILANPDGDYILQQGDEIALVGYPDSHARLDSSFRNGKEVFDRNLLDLRIAEEEIVVKNDNIAGK
RLSELNLSEYGCFLNRVVRAQIEMPIEHDIVLAKGDILQVSGEKSKVHHIADKIGFISIHSQVSDLLAFCSFFILGIMFG
MITMSFGQVTFGLGNAVGLLISGITLGFLRANHPTFGYVPQGALNMTKNLGLLVFMVGIGLSAGGNIIEYFSEDGLKVLA
AALIVSVIPVILAYLVGAYILKMNRALLIGAIIGARTCGPAMDVVNEHARSTIPALGYAGTYAIANILMTVAGTIMILLA
>Mature_560_residues
MNIDVATLLSQNDILLLFVVLALGLFIAKVKIGSFQLGSSIGVLITALFMGSLGYTFTADSLNIGFMLFIFCVGIEAGPN
FFGIFLRDGKHYLLLVLVVLISAISLSFLTGYYFNLDYGLSTGMMAGALTATPVLVGAKDALNSGLAVLPEGVDFSKVMD
NLSVGYAFSYLIGLTSLILLARLLPQLQKQNLQDSAMQIAQERGIGSAGQRKVYLPIIRAYRVGQELIDWTDGKNLRELG
IHRQTGCHIERIRRNGILANPDGDYILQQGDEIALVGYPDSHARLDSSFRNGKEVFDRNLLDLRIAEEEIVVKNDNIAGK
RLSELNLSEYGCFLNRVVRAQIEMPIEHDIVLAKGDILQVSGEKSKVHHIADKIGFISIHSQVSDLLAFCSFFILGIMFG
MITMSFGQVTFGLGNAVGLLISGITLGFLRANHPTFGYVPQGALNMTKNLGLLVFMVGIGLSAGGNIIEYFSEDGLKVLA
AALIVSVIPVILAYLVGAYILKMNRALLIGAIIGARTCGPAMDVVNEHARSTIPALGYAGTYAIANILMTVAGTIMILLA

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains

Homologues:

Organism=Escherichia coli, GI1787071, Length=560, Percent_Identity=64.8214285714286, Blast_Score=753, Evalue=0.0,
Organism=Escherichia coli, GI87082315, Length=570, Percent_Identity=27.719298245614, Blast_Score=160, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2029_ALISL (B6EHQ3)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002263408.1
- GeneID:   6987525
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I2029
- HOGENOM:   HBG298447
- OMA:   DHLSLGY
- ProtClustDB:   PRK04972
- HAMAP:   MF_01015
- InterPro:   IPR006037
- InterPro:   IPR023017
- InterPro:   IPR006512
- TIGRFAMs:   TIGR01625

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 60410; Mature: 60410

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS51202 RCK_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2142e97c)-; HASH(0x217742a0)-; HASH(0x211958b8)-; HASH(0x20acb178)-; HASH(0x21771b6c)-; HASH(0x214f1730)-; HASH(0x2177424c)-; HASH(0x217690dc)-; HASH(0x208dc6dc)-; HASH(0x2177663c)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDVATLLSQNDILLLFVVLALGLFIAKVKIGSFQLGSSIGVLITALFMGSLGYTFTAD
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHEECCEECCCHHHHHHHHHHHCCCCCEEEEC
SLNIGFMLFIFCVGIEAGPNFFGIFLRDGKHYLLLVLVVLISAISLSFLTGYYFNLDYGL
CCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
STGMMAGALTATPVLVGAKDALNSGLAVLPEGVDFSKVMDNLSVGYAFSYLIGLTSLILL
CCCHHHHHHHHCCEEEECHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLPQLQKQNLQDSAMQIAQERGIGSAGQRKVYLPIIRAYRVGQELIDWTDGKNLRELG
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHC
IHRQTGCHIERIRRNGILANPDGDYILQQGDEIALVGYPDSHARLDSSFRNGKEVFDRNL
CCCCCCCHHHHHHHCCEEECCCCCCCEECCCEEEEEECCCHHHHHHHHHCCCHHHHCCCC
LDLRIAEEEIVVKNDNIAGKRLSELNLSEYGCFLNRVVRAQIEMPIEHDIVLAKGDILQV
CEEEEECCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEE
SGEKSKVHHIADKIGFISIHSQVSDLLAFCSFFILGIMFGMITMSFGQVTFGLGNAVGLL
CCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ISGITLGFLRANHPTFGYVPQGALNMTKNLGLLVFMVGIGLSAGGNIIEYFSEDGLKVLA
HHHHHHHHEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCHHHHH
AALIVSVIPVILAYLVGAYILKMNRALLIGAIIGARTCGPAMDVVNEHARSTIPALGYAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHH
TYAIANILMTVAGTIMILLA
HHHHHHHHHHHHHHHHEEEH
>Mature Secondary Structure
MNIDVATLLSQNDILLLFVVLALGLFIAKVKIGSFQLGSSIGVLITALFMGSLGYTFTAD
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHEECCEECCCHHHHHHHHHHHCCCCCEEEEC
SLNIGFMLFIFCVGIEAGPNFFGIFLRDGKHYLLLVLVVLISAISLSFLTGYYFNLDYGL
CCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
STGMMAGALTATPVLVGAKDALNSGLAVLPEGVDFSKVMDNLSVGYAFSYLIGLTSLILL
CCCHHHHHHHHCCEEEECHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLPQLQKQNLQDSAMQIAQERGIGSAGQRKVYLPIIRAYRVGQELIDWTDGKNLRELG
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHC
IHRQTGCHIERIRRNGILANPDGDYILQQGDEIALVGYPDSHARLDSSFRNGKEVFDRNL
CCCCCCCHHHHHHHCCEEECCCCCCCEECCCEEEEEECCCHHHHHHHHHCCCHHHHCCCC
LDLRIAEEEIVVKNDNIAGKRLSELNLSEYGCFLNRVVRAQIEMPIEHDIVLAKGDILQV
CEEEEECCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEE
SGEKSKVHHIADKIGFISIHSQVSDLLAFCSFFILGIMFGMITMSFGQVTFGLGNAVGLL
CCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ISGITLGFLRANHPTFGYVPQGALNMTKNLGLLVFMVGIGLSAGGNIIEYFSEDGLKVLA
HHHHHHHHEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCHHHHH
AALIVSVIPVILAYLVGAYILKMNRALLIGAIIGARTCGPAMDVVNEHARSTIPALGYAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHH
TYAIANILMTVAGTIMILLA
HHHHHHHHHHHHHHHHEEEH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA