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The map label for this gene is ybhK [C]

Identifier: 209695343

GI number: 209695343

Start: 2011826

End: 2012704

Strand: Reverse

Name: ybhK [C]

Synonym: VSAL_I1876

Alternate gene names: 209695343

Gene position: 2012704-2011826 (Counterclockwise)

Preceding gene: 209695348

Following gene: 209695339

Centisome position: 60.53

GC content: 40.96

Gene sequence:

>879_bases
ATGACTGAACATAAAATTGTTGTCATTGGTGGTGGTCACGGCTTAGGGCGAGTTCTTGCTGCGCTTAGTGATTTTGGAAG
CAATGCTACAGGCATAGTAGCAACAACAGATAATGGAGGCTCTACAGGGCGCATTAGAGAGTGCCAAGGAGGAATTGCGT
GGGGAGATACTCGAAATTGTATCAACCAGCTCATTATGGACCCTTCGATTAGCTCTATGATGTTTGAATACCGATTTAAA
GGCCTAGGTGAATTACACGGTCATAATCTTGGAAATCTAATGCTTACCGCGTTAGACAACCTAAGTGTTCGTCCATTGGA
TGCCATTAATTTAATTCGAGATATGCTAAAAGTAGAGACAAACATCATTCCAATGTCTGAGCATCCATCAGATTTAGGCG
CGTTAACCACTGATCTACGTAAAATATCAGGGGAAACCAATGTTGATGACATGGAAGAAGTTCCACTTCGTCTTTTTCTT
GATCCTGAAGTACCAGCAACCTTAGAAGCAATTGATGCAGTAAAAGAAGCGGATTTGATTTTACTTGGACCAGGCAGTTT
TTTAACGAGCATAATGCCACCGTTACTATTACCCGGAATTGGTAAAGCCATTGCAGGAAACAAGCATGCAAAAGTCGTCT
TCATTGATAATTTATCTAAAGAGTTTGGCCCTGCAGGTAAAATGAACCATTCAACGATGTTAGCTTGGTGTGAACGCGCG
TGTTCGGGAAGAAAAGTAGATATCGTTCTAACAGATCGAGAATTAGCTGAGTTACAAAATGAATACGATTGCAGAAAAAC
AGATCTCGCGTCACCAAATCATGATTGGCGACACGATAGAGACAAATTAAAACAAGCTATCGTTGGGCTATTAAACTAA

Upstream 100 bases:

>100_bases
TTACTTAAAACTGTGATTAATTCAACATTTACTTTATTAGTACTTGTCCAATTTATTATTATCCACCACACTCAATTTAC
GTTTTTTAAAGAATATAAAC

Downstream 100 bases:

>100_bases
CCAAGGCAGCTTTAGAATTGGCTTTTATTTTATAATAAAAGCCAATTTCCTAAATCAGAAATTCTCGATAAGCACGCTCT
GTTTGACGAGCAATATCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTEHKIVVIGGGHGLGRVLAALSDFGSNATGIVATTDNGGSTGRIRECQGGIAWGDTRNCINQLIMDPSISSMMFEYRFK
GLGELHGHNLGNLMLTALDNLSVRPLDAINLIRDMLKVETNIIPMSEHPSDLGALTTDLRKISGETNVDDMEEVPLRLFL
DPEVPATLEAIDAVKEADLILLGPGSFLTSIMPPLLLPGIGKAIAGNKHAKVVFIDNLSKEFGPAGKMNHSTMLAWCERA
CSGRKVDIVLTDRELAELQNEYDCRKTDLASPNHDWRHDRDKLKQAIVGLLN

Sequences:

>Translated_292_residues
MTEHKIVVIGGGHGLGRVLAALSDFGSNATGIVATTDNGGSTGRIRECQGGIAWGDTRNCINQLIMDPSISSMMFEYRFK
GLGELHGHNLGNLMLTALDNLSVRPLDAINLIRDMLKVETNIIPMSEHPSDLGALTTDLRKISGETNVDDMEEVPLRLFL
DPEVPATLEAIDAVKEADLILLGPGSFLTSIMPPLLLPGIGKAIAGNKHAKVVFIDNLSKEFGPAGKMNHSTMLAWCERA
CSGRKVDIVLTDRELAELQNEYDCRKTDLASPNHDWRHDRDKLKQAIVGLLN
>Mature_291_residues
TEHKIVVIGGGHGLGRVLAALSDFGSNATGIVATTDNGGSTGRIRECQGGIAWGDTRNCINQLIMDPSISSMMFEYRFKG
LGELHGHNLGNLMLTALDNLSVRPLDAINLIRDMLKVETNIIPMSEHPSDLGALTTDLRKISGETNVDDMEEVPLRLFLD
PEVPATLEAIDAVKEADLILLGPGSFLTSIMPPLLLPGIGKAIAGNKHAKVVFIDNLSKEFGPAGKMNHSTMLAWCERAC
SGRKVDIVLTDRELAELQNEYDCRKTDLASPNHDWRHDRDKLKQAIVGLLN

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=285, Percent_Identity=52.6315789473684, Blast_Score=265, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 31743; Mature: 31612

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHKIVVIGGGHGLGRVLAALSDFGSNATGIVATTDNGGSTGRIRECQGGIAWGDTRNC
CCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCCCCHHHHH
INQLIMDPSISSMMFEYRFKGLGELHGHNLGNLMLTALDNLSVRPLDAINLIRDMLKVET
HHHHHCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NIIPMSEHPSDLGALTTDLRKISGETNVDDMEEVPLRLFLDPEVPATLEAIDAVKEADLI
CEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCEEEEECCCCCHHHHHHHHHHHCCEE
LLGPGSFLTSIMPPLLLPGIGKAIAGNKHAKVVFIDNLSKEFGPAGKMNHSTMLAWCERA
EECCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHCCCCCCCHHHHHHHHHHH
CSGRKVDIVLTDRELAELQNEYDCRKTDLASPNHDWRHDRDKLKQAIVGLLN
CCCCEEEEEECCHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TEHKIVVIGGGHGLGRVLAALSDFGSNATGIVATTDNGGSTGRIRECQGGIAWGDTRNC
CCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCCCCHHHHH
INQLIMDPSISSMMFEYRFKGLGELHGHNLGNLMLTALDNLSVRPLDAINLIRDMLKVET
HHHHHCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NIIPMSEHPSDLGALTTDLRKISGETNVDDMEEVPLRLFLDPEVPATLEAIDAVKEADLI
CEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCEEEEECCCCCHHHHHHHHHHHCCEE
LLGPGSFLTSIMPPLLLPGIGKAIAGNKHAKVVFIDNLSKEFGPAGKMNHSTMLAWCERA
EECCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHCCCCCCCHHHHHHHHHHH
CSGRKVDIVLTDRELAELQNEYDCRKTDLASPNHDWRHDRDKLKQAIVGLLN
CCCCEEEEEECCHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]