Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695348

Identifier: 209695348

GI number: 209695348

Start: 2015333

End: 2016298

Strand: Reverse

Name: 209695348

Synonym: VSAL_I1881

Alternate gene names: NA

Gene position: 2016298-2015333 (Counterclockwise)

Preceding gene: 209695349

Following gene: 209695343

Centisome position: 60.64

GC content: 41.2

Gene sequence:

>966_bases
ATGTTTAGTAGATTCACGTCTCCTTCAAAACTAAAAGCAAAAGGGATCATGGGCATGAATCAACGTAATGGCAGTTATAT
CGGCCGTTACAATGGTCGAAGCAAATACCCATTAGTTGATGATAAGTTAAAAACAAAAGTGATTGCGGTAAAAGCAGGCG
CTACGGTTCCTAAACTTATTGGTGTAATCGATAGCCAAGCTGAAGTGAAGAACATTCACGATATCGTTAAAGATTGGCCT
GGTTTTGTTATCAAACCAGCCCAAGGCAGTGGCGGTAAGGGCATTTTAGTTGTTACTTCTCATAAAGATGGCGTGTATTA
CAAACCATCTGGAGCAGAGGCAAACAAGCAAGATGTAGAGCGACATATTACCAATACACTTGCAGGTCTTTTTTCTCTTA
GTGGAAAAAACGATGTTGCGATGATCGAGAACTTAATCGAGTTTGATGATGTGTTTGACGGTTTCAGTTATGAAGGAGTG
CCAGATGTACGTATTATCGTATTTAAAGGCTACCCTGTAATGGCGATGATGCGTTTATCAACAACAAACTCCGATGGAAA
AGCCAACTTGCACCAAGGTGCTGTTGGTGTGGGTATCGATATAGGGACAGGAAAAGCCGTACGCGCCGTACAATTTGATT
TACCTGTAGAGAACCATCCTGATACGGGTAAATTATTAAGTACGCTAGAAGTCCCTCATTGGCATAAACTATTAACCCTT
GCATCTAGTGCGTGGGAAATGACCGGATTAGGTTATCTGGGTACTGATATGGTACTCGATAAAAAATACGGACCAATGGT
TCTAGAACTTAATGCTCGTCCAGGCTTAGCGATTCAAATTGCAAACGGAACAGGGTTACTCCCTCGTTTAAAGCATATTG
AAAGCTTGGAAGAAACCATTCCCTACCCAACTCCAGAAGCTCGTGTTGCTTATGCAATGGAACAGTTTGGTATTTATAAT
AAATAG

Upstream 100 bases:

>100_bases
TCAGCTAATTATTTTAGCCATTATACTGATGCTTGGTAATTATACTGGTTACCGTTTAAGTGAGCTTCGTCGCTTTAAGC
CTTTAGCGGAGGACTAACCT

Downstream 100 bases:

>100_bases
CTGACCTGTAGAATACATAAAACTAAAAAAGGGAAGAAAGCTTATGCTCTCTTCCCTTTTTATTTATATAAACATCAGCT
AATTCGGTCTATTTTTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha-L-Glutamate Ligase; Alpha-L-Glutamate Ligase-Related Protein; Alpha-L-Glutamate Ligase Family Protein; Glutathione Synthase/Ribosomal; Glutathione Synthase/Ribosomal Protein; Ketopantoate Hydroxymethyltransferase; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Alpha-L-Glutamate Ligase Homolog

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MFSRFTSPSKLKAKGIMGMNQRNGSYIGRYNGRSKYPLVDDKLKTKVIAVKAGATVPKLIGVIDSQAEVKNIHDIVKDWP
GFVIKPAQGSGGKGILVVTSHKDGVYYKPSGAEANKQDVERHITNTLAGLFSLSGKNDVAMIENLIEFDDVFDGFSYEGV
PDVRIIVFKGYPVMAMMRLSTTNSDGKANLHQGAVGVGIDIGTGKAVRAVQFDLPVENHPDTGKLLSTLEVPHWHKLLTL
ASSAWEMTGLGYLGTDMVLDKKYGPMVLELNARPGLAIQIANGTGLLPRLKHIESLEETIPYPTPEARVAYAMEQFGIYN
K

Sequences:

>Translated_321_residues
MFSRFTSPSKLKAKGIMGMNQRNGSYIGRYNGRSKYPLVDDKLKTKVIAVKAGATVPKLIGVIDSQAEVKNIHDIVKDWP
GFVIKPAQGSGGKGILVVTSHKDGVYYKPSGAEANKQDVERHITNTLAGLFSLSGKNDVAMIENLIEFDDVFDGFSYEGV
PDVRIIVFKGYPVMAMMRLSTTNSDGKANLHQGAVGVGIDIGTGKAVRAVQFDLPVENHPDTGKLLSTLEVPHWHKLLTL
ASSAWEMTGLGYLGTDMVLDKKYGPMVLELNARPGLAIQIANGTGLLPRLKHIESLEETIPYPTPEARVAYAMEQFGIYN
K
>Mature_321_residues
MFSRFTSPSKLKAKGIMGMNQRNGSYIGRYNGRSKYPLVDDKLKTKVIAVKAGATVPKLIGVIDSQAEVKNIHDIVKDWP
GFVIKPAQGSGGKGILVVTSHKDGVYYKPSGAEANKQDVERHITNTLAGLFSLSGKNDVAMIENLIEFDDVFDGFSYEGV
PDVRIIVFKGYPVMAMMRLSTTNSDGKANLHQGAVGVGIDIGTGKAVRAVQFDLPVENHPDTGKLLSTLEVPHWHKLLTL
ASSAWEMTGLGYLGTDMVLDKKYGPMVLELNARPGLAIQIANGTGLLPRLKHIESLEETIPYPTPEARVAYAMEQFGIYN
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34962; Mature: 34962

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRFTSPSKLKAKGIMGMNQRNGSYIGRYNGRSKYPLVDDKLKTKVIAVKAGATVPKLI
CCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHH
GVIDSQAEVKNIHDIVKDWPGFVIKPAQGSGGKGILVVTSHKDGVYYKPSGAEANKQDVE
HHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHH
RHITNTLAGLFSLSGKNDVAMIENLIEFDDVFDGFSYEGVPDVRIIVFKGYPVMAMMRLS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEE
TTNSDGKANLHQGAVGVGIDIGTGKAVRAVQFDLPVENHPDTGKLLSTLEVPHWHKLLTL
CCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHH
ASSAWEMTGLGYLGTDMVLDKKYGPMVLELNARPGLAIQIANGTGLLPRLKHIESLEETI
HHCCHHHCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHC
PYPTPEARVAYAMEQFGIYNK
CCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFSRFTSPSKLKAKGIMGMNQRNGSYIGRYNGRSKYPLVDDKLKTKVIAVKAGATVPKLI
CCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHH
GVIDSQAEVKNIHDIVKDWPGFVIKPAQGSGGKGILVVTSHKDGVYYKPSGAEANKQDVE
HHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHH
RHITNTLAGLFSLSGKNDVAMIENLIEFDDVFDGFSYEGVPDVRIIVFKGYPVMAMMRLS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEE
TTNSDGKANLHQGAVGVGIDIGTGKAVRAVQFDLPVENHPDTGKLLSTLEVPHWHKLLTL
CCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHH
ASSAWEMTGLGYLGTDMVLDKKYGPMVLELNARPGLAIQIANGTGLLPRLKHIESLEETI
HHCCHHHCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHC
PYPTPEARVAYAMEQFGIYNK
CCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA