The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695278

Identifier: 209695278

GI number: 209695278

Start: 1925836

End: 1927200

Strand: Reverse

Name: 209695278

Synonym: VSAL_I1803

Alternate gene names: NA

Gene position: 1927200-1925836 (Counterclockwise)

Preceding gene: 209695279

Following gene: 209695273

Centisome position: 57.96

GC content: 37.58

Gene sequence:

>1365_bases
ATGAAGCATATTAAAGCGTTTCATCACTTGTTGACTGATGTAGTCAACCTCAATCAGACAAGACTTTCCAAACTTGAAAC
TGCGGTTCCAACAGTTATTAAGGTAATTAAAGATTCAGAACAATTTGGCGGTATTTATCAATCATCATCACCTCAAGGCT
CTTATGGTCATCGTACAATCATTAAGCCTGTCGCTGGCCGCGAATTTGACGCAGACGTAGTCGTCTTTGTTGACAGACAC
GATGAATGGGAGCCCAAAGACTATATTAATAACATATATCAAGCTTTCAAAGATCATCCCACCTATAAAAATAAGGTTCA
CTATAACACTCGATGTATTAGTCTAGACTACGCTGATGATATGCATATAGATTTGGTTCCCTGCACAGTAGAAGAGTCTA
TGGGGTGGCTTGGTAATTCGTATACCTATTCTATTTGTAATCGCTCAACGAACAAATATGAAGCTACGGACCCTGATGCC
TATAAAGCTTGGATTGCTGACAAAAACAAGACTACACGTAATAACAATCTTATAAAATCGATACGTTTATTTAAGTATTT
GCGAGATATCAAATGTACTTTTTCTTGTAAATCTATACTTCTGACCACTCTCTTAGGTAGTCAAGTGATTGATTCTTACG
ATTTAGTTTCCAACGACTTCAAAGACTTACCCACTTCATTTAAGACTTTAATAAATCGGCTAAACCATGACCTGAAGACA
TACTCTTCTATGCCAGAAATTGAGAACCCAGTTCAAAGTGGCGAGTACTTTACGCGGCACTGGGACGAAACTAAGTTCCA
AAATTTCAAAAAGTTTGTTTCAAAGTATGCCGATTGGGTCAATGATGCTTATGATGAAACTGACAAAGATGCCTCAATAG
AAAAGTGGCGTAAAGTATTTGGCAATCAATTTTTCTCTGTTAAAACTACCCAAGCTAGTAAAGCCGATTCTTTATCACTT
GAAGTTCTTGACGAACGATTTGTTTCGATACCTTCGCATTATCGACCTCACCCTTGGAAGTCGAACGGTTCTGAGGTTAC
ATTAGATGTTGACGTAAAATACAAACAAAATTTTTCACAACACTTTGTTAATAAACTTAGATTCGGCTCACTAATACCTA
AACAGCATAATTTGCGCTTTGAGATAATGAGTAATGTTGACGATTTGCACGAAATTTATTGGCAGGTCACTAATACCGGA
GCAGAAGCAGCAGCCAATAACCAACTAAGGGGCAATTTTGAACTTGGTGAACGAGTTCGAGAAGAAAGCACCTCTTATAA
AGGAGACCATTTTGTGGAGGCTTTTGTAGTACATGAGAACGTACTTCTTGCTCGCTCAGAGAAAATTATAATCTCTATCA
GTTAA

Upstream 100 bases:

>100_bases
AAAAATTCACCACTTTGAACGAAATTCTCAAAATTATCCTTGGTGTCTAGTACTAGATCCTACTAGCGAGTTACCTGTGC
AATTTGAAGAGCGATAACCC

Downstream 100 bases:

>100_bases
TTTATTCATTAAATAAAAAAGCCGAACCTTCTTGATAAAGGTTCGGCATCCTTAAATAATGCTCATTTAAATGTGTTGTA
AAGAGGTTCCCATTCAGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MKHIKAFHHLLTDVVNLNQTRLSKLETAVPTVIKVIKDSEQFGGIYQSSSPQGSYGHRTIIKPVAGREFDADVVVFVDRH
DEWEPKDYINNIYQAFKDHPTYKNKVHYNTRCISLDYADDMHIDLVPCTVEESMGWLGNSYTYSICNRSTNKYEATDPDA
YKAWIADKNKTTRNNNLIKSIRLFKYLRDIKCTFSCKSILLTTLLGSQVIDSYDLVSNDFKDLPTSFKTLINRLNHDLKT
YSSMPEIENPVQSGEYFTRHWDETKFQNFKKFVSKYADWVNDAYDETDKDASIEKWRKVFGNQFFSVKTTQASKADSLSL
EVLDERFVSIPSHYRPHPWKSNGSEVTLDVDVKYKQNFSQHFVNKLRFGSLIPKQHNLRFEIMSNVDDLHEIYWQVTNTG
AEAAANNQLRGNFELGERVREESTSYKGDHFVEAFVVHENVLLARSEKIIISIS

Sequences:

>Translated_454_residues
MKHIKAFHHLLTDVVNLNQTRLSKLETAVPTVIKVIKDSEQFGGIYQSSSPQGSYGHRTIIKPVAGREFDADVVVFVDRH
DEWEPKDYINNIYQAFKDHPTYKNKVHYNTRCISLDYADDMHIDLVPCTVEESMGWLGNSYTYSICNRSTNKYEATDPDA
YKAWIADKNKTTRNNNLIKSIRLFKYLRDIKCTFSCKSILLTTLLGSQVIDSYDLVSNDFKDLPTSFKTLINRLNHDLKT
YSSMPEIENPVQSGEYFTRHWDETKFQNFKKFVSKYADWVNDAYDETDKDASIEKWRKVFGNQFFSVKTTQASKADSLSL
EVLDERFVSIPSHYRPHPWKSNGSEVTLDVDVKYKQNFSQHFVNKLRFGSLIPKQHNLRFEIMSNVDDLHEIYWQVTNTG
AEAAANNQLRGNFELGERVREESTSYKGDHFVEAFVVHENVLLARSEKIIISIS
>Mature_454_residues
MKHIKAFHHLLTDVVNLNQTRLSKLETAVPTVIKVIKDSEQFGGIYQSSSPQGSYGHRTIIKPVAGREFDADVVVFVDRH
DEWEPKDYINNIYQAFKDHPTYKNKVHYNTRCISLDYADDMHIDLVPCTVEESMGWLGNSYTYSICNRSTNKYEATDPDA
YKAWIADKNKTTRNNNLIKSIRLFKYLRDIKCTFSCKSILLTTLLGSQVIDSYDLVSNDFKDLPTSFKTLINRLNHDLKT
YSSMPEIENPVQSGEYFTRHWDETKFQNFKKFVSKYADWVNDAYDETDKDASIEKWRKVFGNQFFSVKTTQASKADSLSL
EVLDERFVSIPSHYRPHPWKSNGSEVTLDVDVKYKQNFSQHFVNKLRFGSLIPKQHNLRFEIMSNVDDLHEIYWQVTNTG
AEAAANNQLRGNFELGERVREESTSYKGDHFVEAFVVHENVLLARSEKIIISIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52634; Mature: 52634

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIKAFHHLLTDVVNLNQTRLSKLETAVPTVIKVIKDSEQFGGIYQSSSPQGSYGHRTI
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCEECCCCCCCCCCCCEE
IKPVAGREFDADVVVFVDRHDEWEPKDYINNIYQAFKDHPTYKNKVHYNTRCISLDYADD
ECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEECCCC
MHIDLVPCTVEESMGWLGNSYTYSICNRSTNKYEATDPDAYKAWIADKNKTTRNNNLIKS
CEEEEEECCHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH
IRLFKYLRDIKCTFSCKSILLTTLLGSQVIDSYDLVSNDFKDLPTSFKTLINRLNHDLKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHH
YSSMPEIENPVQSGEYFTRHWDETKFQNFKKFVSKYADWVNDAYDETDKDASIEKWRKVF
HHCCCHHCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GNQFFSVKTTQASKADSLSLEVLDERFVSIPSHYRPHPWKSNGSEVTLDVDVKYKQNFSQ
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHH
HFVNKLRFGSLIPKQHNLRFEIMSNVDDLHEIYWQVTNTGAEAAANNQLRGNFELGERVR
HHHHHHHHCCCCCCCCCCEEHHHCCHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHH
EESTSYKGDHFVEAFVVHENVLLARSEKIIISIS
HHHCCCCCCHHHEEHEECCCEEEECCCEEEEEEC
>Mature Secondary Structure
MKHIKAFHHLLTDVVNLNQTRLSKLETAVPTVIKVIKDSEQFGGIYQSSSPQGSYGHRTI
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCEECCCCCCCCCCCCEE
IKPVAGREFDADVVVFVDRHDEWEPKDYINNIYQAFKDHPTYKNKVHYNTRCISLDYADD
ECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEECCCC
MHIDLVPCTVEESMGWLGNSYTYSICNRSTNKYEATDPDAYKAWIADKNKTTRNNNLIKS
CEEEEEECCHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH
IRLFKYLRDIKCTFSCKSILLTTLLGSQVIDSYDLVSNDFKDLPTSFKTLINRLNHDLKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHH
YSSMPEIENPVQSGEYFTRHWDETKFQNFKKFVSKYADWVNDAYDETDKDASIEKWRKVF
HHCCCHHCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GNQFFSVKTTQASKADSLSLEVLDERFVSIPSHYRPHPWKSNGSEVTLDVDVKYKQNFSQ
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHH
HFVNKLRFGSLIPKQHNLRFEIMSNVDDLHEIYWQVTNTGAEAAANNQLRGNFELGERVR
HHHHHHHHCCCCCCCCCCEEHHHCCHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHH
EESTSYKGDHFVEAFVVHENVLLARSEKIIISIS
HHHCCCCCCHHHEEHEECCCEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA