The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is huvZ

Identifier: 209695228

GI number: 209695228

Start: 1863104

End: 1863634

Strand: Reverse

Name: huvZ

Synonym: VSAL_I1748

Alternate gene names: NA

Gene position: 1863634-1863104 (Counterclockwise)

Preceding gene: 209695229

Following gene: 209695224

Centisome position: 56.05

GC content: 35.78

Gene sequence:

>531_bases
ATGAACCAAGACATCAAAAAAGAACGTTTACAAAATCGTTTAGAACCAGAAATTCAAGAGTTTCGTGATTCAAAAAAAAC
ACTTCAACTTGCTACGGTTGATAGCGAAGGAAAGCCAAACGTGAGTTATGCACCTTTCGTATTACTTAATGATGGTTACT
ACGTGTTAATTTCAGAAATAGCGCGTCACGCTCGTAATTTAATGCAAAATACAGACGTATCTTTAATGCTTATTGAAGAT
GAAGAATCGTCAAAATTACTTTTTGCTCGTAAGCGTTTAACTTTTGATGCGACAGCCATTTTAATTGATCGTGATGAAGA
TAAATGGCAAGAAGCCGTAACTCAAATGAGACTTCGTTTTGGTGAAATAATTGACGGGCTTAGCTCACTAGAGGACTTTA
AAATGTTTCGTCTTAAGCCAATTAAGGGCTTGTTTGTAAAAGGTTTTGGTCAGGCATTTCAAGTAAGTGGTGATGACTTA
GTGGATTTTGTCCATTTAGAACAAGGTCATAAAAAGCACGAAAAAGCGTAA

Upstream 100 bases:

>100_bases
GGACGAGATAAAAAACGTCAATTACTTCCTGAACAAGTCCGTGCTTTTTGTGTCTTAAAAGAAAAATACGCATAAAAATA
ATTATAGAAAGGAAAGTCAG

Downstream 100 bases:

>100_bases
TTGGCCTCCAATATATAGAATGAACATCAGCCCAAGTATTCGTACTCGGGCTTTTTTATTATAGAAAAGTGAGGTAACTC
TAGAAAATAAAACATACTTT

Product: heme uptake and utilization protein HuvZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNQDIKKERLQNRLEPEIQEFRDSKKTLQLATVDSEGKPNVSYAPFVLLNDGYYVLISEIARHARNLMQNTDVSLMLIED
EESSKLLFARKRLTFDATAILIDRDEDKWQEAVTQMRLRFGEIIDGLSSLEDFKMFRLKPIKGLFVKGFGQAFQVSGDDL
VDFVHLEQGHKKHEKA

Sequences:

>Translated_176_residues
MNQDIKKERLQNRLEPEIQEFRDSKKTLQLATVDSEGKPNVSYAPFVLLNDGYYVLISEIARHARNLMQNTDVSLMLIED
EESSKLLFARKRLTFDATAILIDRDEDKWQEAVTQMRLRFGEIIDGLSSLEDFKMFRLKPIKGLFVKGFGQAFQVSGDDL
VDFVHLEQGHKKHEKA
>Mature_176_residues
MNQDIKKERLQNRLEPEIQEFRDSKKTLQLATVDSEGKPNVSYAPFVLLNDGYYVLISEIARHARNLMQNTDVSLMLIED
EESSKLLFARKRLTFDATAILIDRDEDKWQEAVTQMRLRFGEIIDGLSSLEDFKMFRLKPIKGLFVKGFGQAFQVSGDDL
VDFVHLEQGHKKHEKA

Specific function: Unknown

COG id: COG0748

COG function: function code P; Putative heme iron utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019595
- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002
- InterPro:   IPR014419 [H]

Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]

EC number: NA

Molecular weight: Translated: 20377; Mature: 20377

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQDIKKERLQNRLEPEIQEFRDSKKTLQLATVDSEGKPNVSYAPFVLLNDGYYVLISEI
CCCCHHHHHHHHHCCHHHHHHHCHHHEEEEEEECCCCCCCCCCCCEEEECCCEEHHHHHH
ARHARNLMQNTDVSLMLIEDEESSKLLFARKRLTFDATAILIDRDEDKWQEAVTQMRLRF
HHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHH
GEIIDGLSSLEDFKMFRLKPIKGLFVKGFGQAFQVSGDDLVDFVHLEQGHKKHEKA
HHHHHHHHHHHHHHHHHHCCCCHHEECCCCCEEEECCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNQDIKKERLQNRLEPEIQEFRDSKKTLQLATVDSEGKPNVSYAPFVLLNDGYYVLISEI
CCCCHHHHHHHHHCCHHHHHHHCHHHEEEEEEECCCCCCCCCCCCEEEECCCEEHHHHHH
ARHARNLMQNTDVSLMLIEDEESSKLLFARKRLTFDATAILIDRDEDKWQEAVTQMRLRF
HHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHH
GEIIDGLSSLEDFKMFRLKPIKGLFVKGFGQAFQVSGDDLVDFVHLEQGHKKHEKA
HHHHHHHHHHHHHHHHHHCCCCHHEECCCCCEEEECCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]