| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is huvX
Identifier: 209695229
GI number: 209695229
Start: 1863660
End: 1864166
Strand: Reverse
Name: huvX
Synonym: VSAL_I1749
Alternate gene names: NA
Gene position: 1864166-1863660 (Counterclockwise)
Preceding gene: 209695230
Following gene: 209695228
Centisome position: 56.06
GC content: 33.73
Gene sequence:
>507_bases GTGAAAACAGAAATACTAGCGCTATTTGAAAATGATCCATCTTTATTACCTAGTGAGATGGCAAAACAACTCTCAACAGA GAATCGATTAGTTTCAGAAGGGGAAGTGATTAAAGCATTACCTCATCATATTGTAACGTTAGTTGCAGGAGAAGAAGCTC AAACTATTTTGGAAGGGTTAGTTGGTTTTGGGGATGTAACGACGATTGTTCATTCTTTTGGCTCTATTTTTGAGGTTAAA GCCCCATTCCCTAAAGGAAAACTAGCTCATGGTTACTATAACTTAATGGGATGTAATGGCGAGTTACACGGTCACTTAAA AATAGATTTAATTATTGATATTGCTTTAGTCAGTAAACCATTTCGAGGATCTGAAAGTCATTATTTTGGATTTTTTGATA AAGAAGGAAATTCTATATTTAAGATATATTTAGGACGAGATAAAAAACGTCAATTACTTCCTGAACAAGTCCGTGCTTTT TGTGTCTTAAAAGAAAAATACGCATAA
Upstream 100 bases:
>100_bases GACAGTTTTGGTCAGTAACGTTGGCACAAAGTGTTATTACCGCACTTCAACATGCTCAACGACACATTCAAGCCGCTTAA AATAAAGAAAGAGAGATATT
Downstream 100 bases:
>100_bases AAATAATTATAGAAAGGAAAGTCAGATGAACCAAGACATCAAAAAAGAACGTTTACAAAATCGTTTAGAACCAGAAATTC AAGAGTTTCGTGATTCAAAA
Product: heme uptake and utilization protein HuvX
Products: NA
Alternate protein names: HuvX Protein; Heme Iron Utilization Protein; Coproporphyrinogen III Oxidase; HutX Protein; Heme Utilization Protein HugX; Oxygen-Independent Coproporphyrinogen III Oxidase; HugX Protein; Heme Uptake And Utilization Protein HuvX; Oxygen Independent Coproporphyrinogen III Oxidase; Coproporphyrinogen Dehydrogenase
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKTEILALFENDPSLLPSEMAKQLSTENRLVSEGEVIKALPHHIVTLVAGEEAQTILEGLVGFGDVTTIVHSFGSIFEVK APFPKGKLAHGYYNLMGCNGELHGHLKIDLIIDIALVSKPFRGSESHYFGFFDKEGNSIFKIYLGRDKKRQLLPEQVRAF CVLKEKYA
Sequences:
>Translated_168_residues MKTEILALFENDPSLLPSEMAKQLSTENRLVSEGEVIKALPHHIVTLVAGEEAQTILEGLVGFGDVTTIVHSFGSIFEVK APFPKGKLAHGYYNLMGCNGELHGHLKIDLIIDIALVSKPFRGSESHYFGFFDKEGNSIFKIYLGRDKKRQLLPEQVRAF CVLKEKYA >Mature_168_residues MKTEILALFENDPSLLPSEMAKQLSTENRLVSEGEVIKALPHHIVTLVAGEEAQTILEGLVGFGDVTTIVHSFGSIFEVK APFPKGKLAHGYYNLMGCNGELHGHLKIDLIIDIALVSKPFRGSESHYFGFFDKEGNSIFKIYLGRDKKRQLLPEQVRAF CVLKEKYA
Specific function: Unknown
COG id: COG3721
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18734; Mature: 18734
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEILALFENDPSLLPSEMAKQLSTENRLVSEGEVIKALPHHIVTLVAGEEAQTILEGL CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEEECCHHHHHHHHH VGFGDVTTIVHSFGSIFEVKAPFPKGKLAHGYYNLMGCNGELHGHLKIDLIIDIALVSKP HCCCHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEEEECCCC FRGSESHYFGFFDKEGNSIFKIYLGRDKKRQLLPEQVRAFCVLKEKYA CCCCCCCEEEEEECCCCEEEEEEECCCCHHHHCHHHHHHHHHHHHCCC >Mature Secondary Structure MKTEILALFENDPSLLPSEMAKQLSTENRLVSEGEVIKALPHHIVTLVAGEEAQTILEGL CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEEECCHHHHHHHHH VGFGDVTTIVHSFGSIFEVKAPFPKGKLAHGYYNLMGCNGELHGHLKIDLIIDIALVSKP HCCCHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEEEECCCC FRGSESHYFGFFDKEGNSIFKIYLGRDKKRQLLPEQVRAFCVLKEKYA CCCCCCCEEEEEECCCCEEEEEEECCCCHHHHCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA