| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694770
Identifier: 209694770
GI number: 209694770
Start: 1334541
End: 1334876
Strand: Reverse
Name: 209694770
Synonym: VSAL_I1226
Alternate gene names: NA
Gene position: 1334876-1334541 (Counterclockwise)
Preceding gene: 209694776
Following gene: 209694767
Centisome position: 40.14
GC content: 37.5
Gene sequence:
>336_bases TTGTTCATTCATACTCTTTTCAACATACGAAATAGGAATTTCTTAATACTATTATCAGAAAATACAATGCAACAGACATC AATCAAGTTCTCAGCATTTGGCTTAACACATCAATTAAAGCGCACGATTTTGTGGCTGAAGAGTTTTGGCAATGGCATTG GGCAACAATTAATGACGCACGCTAAACAGCAACGAAATGCACTAAGCTTATCTGTCTATAAACAAAACGAAGCCAGTTAC CAATTCTACTTAAAGCAGGGGTTTTCAGTGAAGAGTGAACAAGCGGATGAGCATACTGGATGCATGGAGTATTCGATGAC GTTTGATGTGAAGTAA
Upstream 100 bases:
>100_bases TACTTGTCACTTAATTCATTCCTCTACAATAAGTAAACAAAAAACGCGCTAATTTATTAAAATAACGCATTCTGTCGTAA ATATTCAATGCTAATCATCA
Downstream 100 bases:
>100_bases TAAGGGAGGAGAGGTAATTAACAACTACCTCTTCTTTTATTTAAGAAGCAAAACCGACAAAATTCTTATCTTCATTTTTA ATACGATTCTGGAAATACAA
Product: hypothetical protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; GCN5-Like N-Acetyltransferase
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MFIHTLFNIRNRNFLILLSENTMQQTSIKFSAFGLTHQLKRTILWLKSFGNGIGQQLMTHAKQQRNALSLSVYKQNEASY QFYLKQGFSVKSEQADEHTGCMEYSMTFDVK
Sequences:
>Translated_111_residues MFIHTLFNIRNRNFLILLSENTMQQTSIKFSAFGLTHQLKRTILWLKSFGNGIGQQLMTHAKQQRNALSLSVYKQNEASY QFYLKQGFSVKSEQADEHTGCMEYSMTFDVK >Mature_111_residues MFIHTLFNIRNRNFLILLSENTMQQTSIKFSAFGLTHQLKRTILWLKSFGNGIGQQLMTHAKQQRNALSLSVYKQNEASY QFYLKQGFSVKSEQADEHTGCMEYSMTFDVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.-
Molecular weight: Translated: 12935; Mature: 12935
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIHTLFNIRNRNFLILLSENTMQQTSIKFSAFGLTHQLKRTILWLKSFGNGIGQQLMTH CEEEEEEEECCCCEEEEECCCCCCHHEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHH AKQQRNALSLSVYKQNEASYQFYLKQGFSVKSEQADEHTGCMEYSMTFDVK HHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MFIHTLFNIRNRNFLILLSENTMQQTSIKFSAFGLTHQLKRTILWLKSFGNGIGQQLMTH CEEEEEEEECCCCEEEEECCCCCCHHEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHH AKQQRNALSLSVYKQNEASYQFYLKQGFSVKSEQADEHTGCMEYSMTFDVK HHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA