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The map label for this gene is ompA [C]

Identifier: 209694767

GI number: 209694767

Start: 1332155

End: 1332745

Strand: Reverse

Name: ompA [C]

Synonym: VSAL_I1223

Alternate gene names: 209694767

Gene position: 1332745-1332155 (Counterclockwise)

Preceding gene: 209694770

Following gene: 209694766

Centisome position: 40.08

GC content: 40.44

Gene sequence:

>591_bases
ATGAAAAAACCGATACTATTATTAGCGTTACTGTCTGCTTGTTCATACGCAAATGCCGCAGCAAATGATGTCTCTGGCGT
TTACTTAGGCGGTGGTTTTGGTACGACTGATTTTGATGATGATGGTGGCTTTGGTTCAGCTAACATTAATGATAATGACT
CTACCTTTAAATTAATTGGTGGCTACCAGTTTAACCGCATTGTTGCAGTAGAAATGCAATATACAAAATACGGTGATTTA
AAACTTACCCATTATAACTCTCCTATTAACGGAACCGTTGAGCATTCTTCTGTATCACTTGCCGCAAACGTAGGTTATAC
CTTTGGCAGCGGTTGGAGACCATTTGCTATTGCTGGCCTAGGTTCAATAGAACAATCAGGAAAAGCATACGGACTTTCTG
ATAGCGATAGCGGTACTTCTTTCCACTATGGTGCAGGTGTTGAATATACACCTAAAACATTAGGTGGCCTTGCCTTCCGT
GTTGCTTATGAAGGCGACCTCTTTGTTGTTGATTCTGGCAGTAATAATATCGATGATGATTACGCAATGACAATTGGTAC
ATTGTACGCTGGCGCAACTTACAAATTCTAA

Upstream 100 bases:

>100_bases
TTCACATATTTGTATTTAGTGTGGAACTCATTTAGTTTATTTTCATCGTCTATTTACTATGTAGTTAACTTTACCTATAA
GATTTATACGGAACAACAAA

Downstream 100 bases:

>100_bases
TAATAACGATTGTTGGCTAGGCTAGGATACGAATAAAAACGGGGAACTTTTGATTGCCCGTTTTTTATTTCAACTCGAAT
AACAATATGACGTTAAAAAT

Product: outer membrane protein A precursor

Products: NA

Alternate protein names: Outer Membrane Protein A

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKKPILLLALLSACSYANAAANDVSGVYLGGGFGTTDFDDDGGFGSANINDNDSTFKLIGGYQFNRIVAVEMQYTKYGDL
KLTHYNSPINGTVEHSSVSLAANVGYTFGSGWRPFAIAGLGSIEQSGKAYGLSDSDSGTSFHYGAGVEYTPKTLGGLAFR
VAYEGDLFVVDSGSNNIDDDYAMTIGTLYAGATYKF

Sequences:

>Translated_196_residues
MKKPILLLALLSACSYANAAANDVSGVYLGGGFGTTDFDDDGGFGSANINDNDSTFKLIGGYQFNRIVAVEMQYTKYGDL
KLTHYNSPINGTVEHSSVSLAANVGYTFGSGWRPFAIAGLGSIEQSGKAYGLSDSDSGTSFHYGAGVEYTPKTLGGLAFR
VAYEGDLFVVDSGSNNIDDDYAMTIGTLYAGATYKF
>Mature_196_residues
MKKPILLLALLSACSYANAAANDVSGVYLGGGFGTTDFDDDGGFGSANINDNDSTFKLIGGYQFNRIVAVEMQYTKYGDL
KLTHYNSPINGTVEHSSVSLAANVGYTFGSGWRPFAIAGLGSIEQSGKAYGLSDSDSGTSFHYGAGVEYTPKTLGGLAFR
VAYEGDLFVVDSGSNNIDDDYAMTIGTLYAGATYKF

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20659; Mature: 20659

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPILLLALLSACSYANAAANDVSGVYLGGGFGTTDFDDDGGFGSANINDNDSTFKLIG
CCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCCCEEEEEC
GYQFNRIVAVEMQYTKYGDLKLTHYNSPINGTVEHSSVSLAANVGYTFGSGWRPFAIAGL
CEEECEEEEEEEEECCCCCEEEEEECCCCCCEEECCEEEEEEECCEECCCCCCCEEEEEC
GSIEQSGKAYGLSDSDSGTSFHYGAGVEYTPKTLGGLAFRVAYEGDLFVVDSGSNNIDDD
CCCCCCCCEECCCCCCCCCEEEECCCCEECCCCCCCEEEEEEECCCEEEEECCCCCCCCC
YAMTIGTLYAGATYKF
CEEEEEHEECCEEECC
>Mature Secondary Structure
MKKPILLLALLSACSYANAAANDVSGVYLGGGFGTTDFDDDGGFGSANINDNDSTFKLIG
CCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCCCEEEEEC
GYQFNRIVAVEMQYTKYGDLKLTHYNSPINGTVEHSSVSLAANVGYTFGSGWRPFAIAGL
CEEECEEEEEEEEECCCCCEEEEEECCCCCCEEECCEEEEEEECCEECCCCCCCEEEEEC
GSIEQSGKAYGLSDSDSGTSFHYGAGVEYTPKTLGGLAFRVAYEGDLFVVDSGSNNIDDD
CCCCCCCCEECCCCCCCCCEEEECCCCEECCCCCCCEEEEEEECCCEEEEECCCCCCCCC
YAMTIGTLYAGATYKF
CEEEEEHEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA