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The map label for this gene is ygaZ [H]

Identifier: 209694734

GI number: 209694734

Start: 1295639

End: 1296352

Strand: Direct

Name: ygaZ [H]

Synonym: VSAL_I1188

Alternate gene names: 209694734

Gene position: 1295639-1296352 (Clockwise)

Preceding gene: 209694733

Following gene: 209694735

Centisome position: 38.96

GC content: 42.58

Gene sequence:

>714_bases
ATGGATATAAATACCGCCGTACAACCTTGTTCTAATTCTCGTCTTTTTTGGCAAGGCACATTCGCTATGATCCCTCTTAG
TATTGCAGTATTACCATGGGGGTTATTAGCAGGATCATTCGCGATAGATGTTGGATTAACGCCTTTTGAAGGCCAAGCGC
TTTCGGCTATATTATTCGCAGGATCAGCACAGCTCGTTGCCATGGGGATGATCAAAGCAGGCGCAGGGCTAACAACCATG
TTGCTGACAACTTTTTTTATTACCTCGCGTCATTTTTTATATAGAGTCTCGATGAGAGATAAAATCAGCCCTTTACCGCT
TCGTTGGCGTTTGTCGTTGGGCTTTCTGCTGACGGACGAATTATTTGCGGTGTGTGGGCATCAATCTAAAAAACAGTTTA
ATCGGTGGTATGCATTAGGGGCTGGGTTCAGTTTTTATTTCTTTTGGAATGTTGCTACGTTGGCTGGAATTATTGCAAGC
AGTTATCTTCCCTCATTAAATGAATTGGGGTTAGAGTTTGCTGTTGTCGCTACCTTTATCGCGATTGTCGTACCTACCAT
AAAAAACATACCAGTATTGGTCTCGGTGTTGAGTGCGTTAGTACTTTCTGTCGTATTAAATTATTTCTCAGTAGAAGGGA
GTTTGATGATAGCAAGCATTGGTGGCATGTGTTTAGGGTATTTAACGGAAACCCTAAGAGGGGGTAGGTCATGA

Upstream 100 bases:

>100_bases
CCCAGGGCAATACCTCAAACTGTTTTAGCAAGTTTGTACAATCTTAGGTAAAGGAATACAGCTCTAATATAGGCTGATTT
GATTTAATAAAGAGTAGTTT

Downstream 100 bases:

>100_bases
TATTTTTATCGATCTTAGCCATGACGACATTGGTGTTTTTAAGCCGCTATTTATTTTTAGAACCTAAACTCCCACTGCGA
CTTAATGCTCAAACGCAACG

Product: branched-chain amino acid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MDINTAVQPCSNSRLFWQGTFAMIPLSIAVLPWGLLAGSFAIDVGLTPFEGQALSAILFAGSAQLVAMGMIKAGAGLTTM
LLTTFFITSRHFLYRVSMRDKISPLPLRWRLSLGFLLTDELFAVCGHQSKKQFNRWYALGAGFSFYFFWNVATLAGIIAS
SYLPSLNELGLEFAVVATFIAIVVPTIKNIPVLVSVLSALVLSVVLNYFSVEGSLMIASIGGMCLGYLTETLRGGRS

Sequences:

>Translated_237_residues
MDINTAVQPCSNSRLFWQGTFAMIPLSIAVLPWGLLAGSFAIDVGLTPFEGQALSAILFAGSAQLVAMGMIKAGAGLTTM
LLTTFFITSRHFLYRVSMRDKISPLPLRWRLSLGFLLTDELFAVCGHQSKKQFNRWYALGAGFSFYFFWNVATLAGIIAS
SYLPSLNELGLEFAVVATFIAIVVPTIKNIPVLVSVLSALVLSVVLNYFSVEGSLMIASIGGMCLGYLTETLRGGRS
>Mature_237_residues
MDINTAVQPCSNSRLFWQGTFAMIPLSIAVLPWGLLAGSFAIDVGLTPFEGQALSAILFAGSAQLVAMGMIKAGAGLTTM
LLTTFFITSRHFLYRVSMRDKISPLPLRWRLSLGFLLTDELFAVCGHQSKKQFNRWYALGAGFSFYFFWNVATLAGIIAS
SYLPSLNELGLEFAVVATFIAIVVPTIKNIPVLVSVLSALVLSVVLNYFSVEGSLMIASIGGMCLGYLTETLRGGRS

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=235, Percent_Identity=28.936170212766, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 25654; Mature: 25654

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINTAVQPCSNSRLFWQGTFAMIPLSIAVLPWGLLAGSFAIDVGLTPFEGQALSAILFA
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHC
GSAQLVAMGMIKAGAGLTTMLLTTFFITSRHFLYRVSMRDKISPLPLRWRLSLGFLLTDE
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECHHCCCCCCCEEEEEEECHHHHHH
LFAVCGHQSKKQFNRWYALGAGFSFYFFWNVATLAGIIASSYLPSLNELGLEFAVVATFI
HHHHHCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AIVVPTIKNIPVLVSVLSALVLSVVLNYFSVEGSLMIASIGGMCLGYLTETLRGGRS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDINTAVQPCSNSRLFWQGTFAMIPLSIAVLPWGLLAGSFAIDVGLTPFEGQALSAILFA
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHC
GSAQLVAMGMIKAGAGLTTMLLTTFFITSRHFLYRVSMRDKISPLPLRWRLSLGFLLTDE
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECHHCCCCCCCEEEEEEECHHHHHH
LFAVCGHQSKKQFNRWYALGAGFSFYFFWNVATLAGIIASSYLPSLNELGLEFAVVATFI
HHHHHCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AIVVPTIKNIPVLVSVLSALVLSVVLNYFSVEGSLMIASIGGMCLGYLTETLRGGRS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]