Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694735

Identifier: 209694735

GI number: 209694735

Start: 1296349

End: 1296669

Strand: Direct

Name: 209694735

Synonym: VSAL_I1189

Alternate gene names: NA

Gene position: 1296349-1296669 (Clockwise)

Preceding gene: 209694734

Following gene: 209694737

Centisome position: 38.99

GC content: 38.94

Gene sequence:

>321_bases
ATGATATTTTTATCGATCTTAGCCATGACGACATTGGTGTTTTTAAGCCGCTATTTATTTTTAGAACCTAAACTCCCACT
GCGACTTAATGCTCAAACGCAACGGTTATTAAGTTATTCTAGTCCGGCGGTGTTAACCGCTATTTGGGCTCCAATTGTGT
TTATGCCAAACAATGAGTTGTCTCTATCTGGTTCTAATCCGTACTTATGGGCCGCATTAATTGCGGCAGTAATCGCATGG
AAAACTAAGAATGTATTATTGACGACCATTGTAAGCATGGTGGTGTTTCTAGTGCTGAATTTATGGGTATTTATAGGGTA
A

Upstream 100 bases:

>100_bases
TCGTATTAAATTATTTCTCAGTAGAAGGGAGTTTGATGATAGCAAGCATTGGTGGCATGTGTTTAGGGTATTTAACGGAA
ACCCTAAGAGGGGGTAGGTC

Downstream 100 bases:

>100_bases
GGCTACCTTGCGACCCATTCCGTTTCTATTAGGGTTTTATCGCCTGATTTTAAGCGACTAAGAAAAATATCACCGCAGTG
GATTTCGCCTACGCCTTGTG

Product: branched-chain amino acid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MIFLSILAMTTLVFLSRYLFLEPKLPLRLNAQTQRLLSYSSPAVLTAIWAPIVFMPNNELSLSGSNPYLWAALIAAVIAW
KTKNVLLTTIVSMVVFLVLNLWVFIG

Sequences:

>Translated_106_residues
MIFLSILAMTTLVFLSRYLFLEPKLPLRLNAQTQRLLSYSSPAVLTAIWAPIVFMPNNELSLSGSNPYLWAALIAAVIAW
KTKNVLLTTIVSMVVFLVLNLWVFIG
>Mature_106_residues
MIFLSILAMTTLVFLSRYLFLEPKLPLRLNAQTQRLLSYSSPAVLTAIWAPIVFMPNNELSLSGSNPYLWAALIAAVIAW
KTKNVLLTTIVSMVVFLVLNLWVFIG

Specific function: Unknown

COG id: COG4392

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11885; Mature: 11885

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFLSILAMTTLVFLSRYLFLEPKLPLRLNAQTQRLLSYSSPAVLTAIWAPIVFMPNNEL
CHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCHHHHHHHHCEEECCCCCE
SLSGSNPYLWAALIAAVIAWKTKNVLLTTIVSMVVFLVLNLWVFIG
EECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFLSILAMTTLVFLSRYLFLEPKLPLRLNAQTQRLLSYSSPAVLTAIWAPIVFMPNNEL
CHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCHHHHHHHHCEEECCCCCE
SLSGSNPYLWAALIAAVIAWKTKNVLLTTIVSMVVFLVLNLWVFIG
EECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA