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The map label for this gene is vasE-1

Identifier: 209694728

GI number: 209694728

Start: 1285784

End: 1287100

Strand: Direct

Name: vasE-1

Synonym: VSAL_I1181

Alternate gene names: NA

Gene position: 1285784-1287100 (Clockwise)

Preceding gene: 209694727

Following gene: 209694729

Centisome position: 38.67

GC content: 37.97

Gene sequence:

>1317_bases
ATGGACAATAAAAAAGTCGTTTGGAGTGAAGGAATGTTTCTTTCTCCGCAGCATTTTCAACAGCAAACACGTTATATTGA
ACATTTAACTCGTGAATTTACAGAACAAATTGCACCTCAAGGAAGTGGACTAACCTTACTTGAACTTGATCGCTCTATGC
TTAATATAGGTAAAGTTTCTGTTCGTCGGGCAAGGGGGATCTTTCAGGATGGAACGCCATTTGAAATTAATCGTGGTCTT
GTTTTAGATATACCTAAAAATACAAATCACAAAAAAGTATATCTTGCTTTATCTGTATCACGACCTGGTGCGGTAGATGT
TGGGGCCAATCAGCATTTACGTCATTCTTCTGTAGATCATCCAGTATTCGATACTAGTCGTGAGCACTGTGAATCAGTAC
TGCTAGAGATTGCTGAGCTTAATATTGTTTTAAAATTAGAAGATGAAGAGTTACAAGATTACACTCTCATATCCGTTTGT
GAGGTAATTGAGCATAAATCAGAAGGTGCAGTACTTCTTAATCAAGCTTTTGTACCGCATTGTTTGCAGTTTGGAGTATC
TAATTATCTGAAAGATAGTGTGGCTGACGTTTTAGCCCAAGTGCAGTATCGTGTAATGACAATATCGACTCGACTGCAAA
CTGAAAATGACAGTAAAAGTTATCAAGCGATGATGCGTGATTATTTATGGCTGCAAGCCTTAGGTGCTTGGATGCCTAAA
TTACAACAATGGAATCAAGATGGCAGCTTATTAACTAAACACTTGTATTTAGAATGCCTGTCAATGGCAGGTCAAATGCA
AGGTCTTGAAGGAAAAATGCCTAAAGACTCTTTAGTGTGGGATCAAAACAACTTATACAGCATCTTTTCTGTGATTTTCT
CTGAATTATTAGTGTTGTTACGTGAAGTTCAAATAGATAACTTAACAACTTTATCATGGGATAAGCAATTATTTGTTTCT
CGACGTTTACTCCGCACATTAGTTAAAGATCGCAGTTTATATAATGAAGGACGTTTTATTCTGGTTGCTACGTCCCCCTT
AGGTGCATCGCGTCTTAGTGAAGAGTTTCCTAAAGCGATTAAACTTGCAGGTAATAGTGATATTGCGGGTTTAGTTCGTA
ATGCCTTATCCGGTGTTGGGTTACGAAACCTGCCTTATGCGCCTTCAGAGCTTAAATCTAAACACGATGCCGCGTATTTT
GAAATTGATACTAAATCTGAATTATGGCAAGCCTTAGTGAAAAATGATGAGCCTATCGCCTTGCATATCGACGACCGTAT
CGAAGATGTTCACGTTGAATTTCATGTAATTAGGTAG

Upstream 100 bases:

>100_bases
AAAATAAAGTTATCTATAAACCGATAATCTTAGGAATTACAGCCATTAATATTGAAGTCGATGGGATTAATCTATCAGTA
TCAGGCGAAGAGGAATAATA

Downstream 100 bases:

>100_bases
GTGGTTTGTGAGTGAATTATTTAATGACGAAGCGACAATAGAACTTCGTCATACTAAAGAAAAAATACCGGCAAAGAAAA
AAAATGCAGAACTTAAGGAT

Product: type VI secretion protein VasE-1

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MDNKKVVWSEGMFLSPQHFQQQTRYIEHLTREFTEQIAPQGSGLTLLELDRSMLNIGKVSVRRARGIFQDGTPFEINRGL
VLDIPKNTNHKKVYLALSVSRPGAVDVGANQHLRHSSVDHPVFDTSREHCESVLLEIAELNIVLKLEDEELQDYTLISVC
EVIEHKSEGAVLLNQAFVPHCLQFGVSNYLKDSVADVLAQVQYRVMTISTRLQTENDSKSYQAMMRDYLWLQALGAWMPK
LQQWNQDGSLLTKHLYLECLSMAGQMQGLEGKMPKDSLVWDQNNLYSIFSVIFSELLVLLREVQIDNLTTLSWDKQLFVS
RRLLRTLVKDRSLYNEGRFILVATSPLGASRLSEEFPKAIKLAGNSDIAGLVRNALSGVGLRNLPYAPSELKSKHDAAYF
EIDTKSELWQALVKNDEPIALHIDDRIEDVHVEFHVIR

Sequences:

>Translated_438_residues
MDNKKVVWSEGMFLSPQHFQQQTRYIEHLTREFTEQIAPQGSGLTLLELDRSMLNIGKVSVRRARGIFQDGTPFEINRGL
VLDIPKNTNHKKVYLALSVSRPGAVDVGANQHLRHSSVDHPVFDTSREHCESVLLEIAELNIVLKLEDEELQDYTLISVC
EVIEHKSEGAVLLNQAFVPHCLQFGVSNYLKDSVADVLAQVQYRVMTISTRLQTENDSKSYQAMMRDYLWLQALGAWMPK
LQQWNQDGSLLTKHLYLECLSMAGQMQGLEGKMPKDSLVWDQNNLYSIFSVIFSELLVLLREVQIDNLTTLSWDKQLFVS
RRLLRTLVKDRSLYNEGRFILVATSPLGASRLSEEFPKAIKLAGNSDIAGLVRNALSGVGLRNLPYAPSELKSKHDAAYF
EIDTKSELWQALVKNDEPIALHIDDRIEDVHVEFHVIR
>Mature_438_residues
MDNKKVVWSEGMFLSPQHFQQQTRYIEHLTREFTEQIAPQGSGLTLLELDRSMLNIGKVSVRRARGIFQDGTPFEINRGL
VLDIPKNTNHKKVYLALSVSRPGAVDVGANQHLRHSSVDHPVFDTSREHCESVLLEIAELNIVLKLEDEELQDYTLISVC
EVIEHKSEGAVLLNQAFVPHCLQFGVSNYLKDSVADVLAQVQYRVMTISTRLQTENDSKSYQAMMRDYLWLQALGAWMPK
LQQWNQDGSLLTKHLYLECLSMAGQMQGLEGKMPKDSLVWDQNNLYSIFSVIFSELLVLLREVQIDNLTTLSWDKQLFVS
RRLLRTLVKDRSLYNEGRFILVATSPLGASRLSEEFPKAIKLAGNSDIAGLVRNALSGVGLRNLPYAPSELKSKHDAAYF
EIDTKSELWQALVKNDEPIALHIDDRIEDVHVEFHVIR

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49845; Mature: 49845

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKKVVWSEGMFLSPQHFQQQTRYIEHLTREFTEQIAPQGSGLTLLELDRSMLNIGKVS
CCCCEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH
VRRARGIFQDGTPFEINRGLVLDIPKNTNHKKVYLALSVSRPGAVDVGANQHLRHSSVDH
HHHHHCCCCCCCCEEECCCEEEECCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCC
PVFDTSREHCESVLLEIAELNIVLKLEDEELQDYTLISVCEVIEHKSEGAVLLNQAFVPH
CCCCCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHH
CLQFGVSNYLKDSVADVLAQVQYRVMTISTRLQTENDSKSYQAMMRDYLWLQALGAWMPK
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LQQWNQDGSLLTKHLYLECLSMAGQMQGLEGKMPKDSLVWDQNNLYSIFSVIFSELLVLL
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
REVQIDNLTTLSWDKQLFVSRRLLRTLVKDRSLYNEGRFILVATSPLGASRLSEEFPKAI
HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHE
KLAGNSDIAGLVRNALSGVGLRNLPYAPSELKSKHDAAYFEIDTKSELWQALVKNDEPIA
EECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEECCHHHHHHHHHCCCCCEE
LHIDDRIEDVHVEFHVIR
EEECCCCEEEEEEEEEEC
>Mature Secondary Structure
MDNKKVVWSEGMFLSPQHFQQQTRYIEHLTREFTEQIAPQGSGLTLLELDRSMLNIGKVS
CCCCEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH
VRRARGIFQDGTPFEINRGLVLDIPKNTNHKKVYLALSVSRPGAVDVGANQHLRHSSVDH
HHHHHCCCCCCCCEEECCCEEEECCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCC
PVFDTSREHCESVLLEIAELNIVLKLEDEELQDYTLISVCEVIEHKSEGAVLLNQAFVPH
CCCCCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHH
CLQFGVSNYLKDSVADVLAQVQYRVMTISTRLQTENDSKSYQAMMRDYLWLQALGAWMPK
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LQQWNQDGSLLTKHLYLECLSMAGQMQGLEGKMPKDSLVWDQNNLYSIFSVIFSELLVLL
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
REVQIDNLTTLSWDKQLFVSRRLLRTLVKDRSLYNEGRFILVATSPLGASRLSEEFPKAI
HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHE
KLAGNSDIAGLVRNALSGVGLRNLPYAPSELKSKHDAAYFEIDTKSELWQALVKNDEPIA
EECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEECCHHHHHHHHHCCCCCEE
LHIDDRIEDVHVEFHVIR
EEECCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA