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The map label for this gene is vasD-1

Identifier: 209694727

GI number: 209694727

Start: 1285317

End: 1285781

Strand: Direct

Name: vasD-1

Synonym: VSAL_I1180

Alternate gene names: NA

Gene position: 1285317-1285781 (Clockwise)

Preceding gene: 209694726

Following gene: 209694728

Centisome position: 38.65

GC content: 34.41

Gene sequence:

>465_bases
ATGAGAAAGTGGTTAATGTCATCTATTGTTGTTTTGTTACTATCAGGTTGTAGTTTTAGTGGTGAAGAATTTACTCCTCA
AGTTGTACTTAATATAAAAGCTGCTTCAAATATCAACCCTAATGTAGAAGGAAAGCCTTCACCGTTAGAATTACGTGTAT
ATCAGTTAACTGATAGTCAAGCGTTTTCACAGGCAGATTTTATTCAAATTTATAATGATGAGCAGGGTGTCTTAAAAGCA
GAGTTATTACTTGCTCGTCAATTAGAAAGCATTTTACCAGGAGAAACACGTCAAGAAGTATTTCCTCTTGCTGCAGAAAC
TAAATATATCGGTGTTATTGCAGAGTTTGCTGCCTACCGTGAAGCAAAAAATAAAGTTATCTATAAACCGATAATCTTAG
GAATTACAGCCATTAATATTGAAGTCGATGGGATTAATCTATCAGTATCAGGCGAAGAGGAATAA

Upstream 100 bases:

>100_bases
ATTTTACTCGACAAGTTGAAAACAAAGATTGGCAAATTAAATTTCATGCTTATTTTCATGATGCAATCCGTCTGCAGCGT
AACCTAGAACGAGGCAACAA

Downstream 100 bases:

>100_bases
TAATGGACAATAAAAAAGTCGTTTGGAGTGAAGGAATGTTTCTTTCTCCGCAGCATTTTCAACAGCAAACACGTTATATT
GAACATTTAACTCGTGAATT

Product: type VI secretion protein VasD-1

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein; Type VI Secretion Lipoprotein/VasD; Type VI Secretion

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRKWLMSSIVVLLLSGCSFSGEEFTPQVVLNIKAASNINPNVEGKPSPLELRVYQLTDSQAFSQADFIQIYNDEQGVLKA
ELLLARQLESILPGETRQEVFPLAAETKYIGVIAEFAAYREAKNKVIYKPIILGITAINIEVDGINLSVSGEEE

Sequences:

>Translated_154_residues
MRKWLMSSIVVLLLSGCSFSGEEFTPQVVLNIKAASNINPNVEGKPSPLELRVYQLTDSQAFSQADFIQIYNDEQGVLKA
ELLLARQLESILPGETRQEVFPLAAETKYIGVIAEFAAYREAKNKVIYKPIILGITAINIEVDGINLSVSGEEE
>Mature_154_residues
MRKWLMSSIVVLLLSGCSFSGEEFTPQVVLNIKAASNINPNVEGKPSPLELRVYQLTDSQAFSQADFIQIYNDEQGVLKA
ELLLARQLESILPGETRQEVFPLAAETKYIGVIAEFAAYREAKNKVIYKPIILGITAINIEVDGINLSVSGEEE

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17018; Mature: 17018

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKWLMSSIVVLLLSGCSFSGEEFTPQVVLNIKAASNINPNVEGKPSPLELRVYQLTDSQ
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCC
AFSQADFIQIYNDEQGVLKAELLLARQLESILPGETRQEVFPLAAETKYIGVIAEFAAYR
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHH
EAKNKVIYKPIILGITAINIEVDGINLSVSGEEE
HHCCCEEEEEEEEEEEEEEEEECCEEEEECCCCC
>Mature Secondary Structure
MRKWLMSSIVVLLLSGCSFSGEEFTPQVVLNIKAASNINPNVEGKPSPLELRVYQLTDSQ
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCC
AFSQADFIQIYNDEQGVLKAELLLARQLESILPGETRQEVFPLAAETKYIGVIAEFAAYR
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHH
EAKNKVIYKPIILGITAINIEVDGINLSVSGEEE
HHCCCEEEEEEEEEEEEEEEEECCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA