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The map label for this gene is vasA-1

Identifier: 209694722

GI number: 209694722

Start: 1278703

End: 1280484

Strand: Direct

Name: vasA-1

Synonym: VSAL_I1175

Alternate gene names: NA

Gene position: 1278703-1280484 (Clockwise)

Preceding gene: 209694721

Following gene: 209694723

Centisome position: 38.46

GC content: 35.07

Gene sequence:

>1782_bases
TTGTCTGATACATTACTGACATATTTTGAACAAGAACTGCGCTTTATTCGAGAGGAAGCGTCGTATTTTTCAGCTCGTCA
TCCGGGAGCTACAGAAGCACTCGGCATAAGAAAAGACAGTATTGATGATCCTCAAATTTCCCGTTTAATTGAAAGCGTGG
CTTTTTTGAATGGTAGATTACAACAGCGTTTAGACGATTCTTTTCCTGAATTTACTGAAAGTCTTATTCGTTTACTTTTT
CCTCATTACTTACGTCCAATTCCTTCGTATAGCTTGCTTGATTTTGTGGTTAATAATGATACCAATGCCACTCACCATAT
TCCGTCAGGAACAGAGTTTGAAGTGCGTGATGAACAGATCAATAGTGCCATATTTCGTACAACAGAAGAGGTAGCCCTTT
ACCCTTTAAAAATAGAAAGAGTTAACGTTTCTTTTGCTCCATTTGAGTTAGAAAAACCAAAAGGTGCAGAACAATCAAAT
GCTTTGATAGAAATATCGATCTCTACGGTGGATGATACCGTTGTACTTTCTGAATTATTGATTGAATCATTAAAGCTTCA
TTTTAAAGGTGAAACCAACTTTGCATTGCGATTGTTTGATCTTTTATCACAAGGTACATCTCAAATTTGTGTCTCAGCAC
AAGGTAAAAGCTATGAGCTAAGTAGAAATGCAATGAAGCCTGTTGGTTTTGAGGTTAATGATACGATTCTTCCTTATCAA
GCGGCGAGCTTTGGTGGCTTTAAGTTGTTAACTGAATTCTTTATGTTTTCAGAGCGATTTAATGGTTTTCATTTTAATTT
TGGTGATGTATTAAAGCAGATCGATAGTCATCAATTTAAACTTCAAATATTTATTGATGAATTAAGTGTAGATTTTGCTA
GAAGCTTATCTGCCGAACGTTTTTCACTATTTACCACACCGATAGTGAATTTACATCAAATGGTTTCAGATCCGCTTGAC
GTTGATTTTTTTAAGAAACAATACCCAATAATACTTGATGCAAATCAAGGGCATAATTTAGAGCTATTTTCAGTTGATGA
AGTTATGGATGTTACACAAGTAGAACCTACCAAAATAGCTCAAATTTATGGTGAAAAATTTAATGGTAGTGAATCAGGGT
TGCGTTGGCAGTTAGTGCAGACTCTACATGAAAATGGTTTGTTAGAAAGTGCATTAAAAGTAGCTGATCTGGAGCATATT
AGTGCAGAAAGTGAATCTCAAACTTGGTTAGTGAATGCAACGGTGACTGATGGCATGGTAACGAGCCATTTATCATTATT
AAGTGAAATTGAATGTCGTGAATCATTAACTATTCCAGCAGATATCCAGTTATTACGTCGACCATCATTACCTATGCGTA
GTAAAGAAACCAATAAAAATGTATGGACTTTACTGTGTCATTTACATTTTAATTACCATTCTATTTTAGGCTCAGATGAT
CCTGTTGAAACATTAAAAAATGTATTTGATTTATATAATCATAATCAAAACCCACAAAATTACGCTTATATCGAATCTGT
AACGACAATAGAGCAAGAACAAGTAGTCGCTCCAATTCGAATATCAGGAAAAACATGTTTTGCTTACGGAACGAAGATAA
CAATCACTCTTGATCCTACTAATGTGAATGGAGGGATCTGCTTGTTTGGCCATATTCTTGAACGCTTCTTTGCGTATTTT
GCAGGGTTTAATAGTTTTACTCAGGTAAATATTAAGTTGAAGGGACAAGATGAGCTTTATATGGCCTTTCCAAGGAGATC
TGGATGCAAAATTTTGTTGTAG

Upstream 100 bases:

>100_bases
ATTTCTGCGACGATGTTATCTGACCAAGGCGAAGAAGCCATTGTATTGAATTCCTTTTTGGATCTAAGTCGAAACATATT
GGATGTAAGGAAATCAAATT

Downstream 100 bases:

>100_bases
TACGTTTAAATAATAATCAACAAGATGTTGAGTTAGATAAAGCGTGGCAGCTATTTAAGCATCAAGCTGAGCATAATGGA
GTTCGTCCGAATATAGCTTT

Product: type VI secretion protein VasA-1

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MSDTLLTYFEQELRFIREEASYFSARHPGATEALGIRKDSIDDPQISRLIESVAFLNGRLQQRLDDSFPEFTESLIRLLF
PHYLRPIPSYSLLDFVVNNDTNATHHIPSGTEFEVRDEQINSAIFRTTEEVALYPLKIERVNVSFAPFELEKPKGAEQSN
ALIEISISTVDDTVVLSELLIESLKLHFKGETNFALRLFDLLSQGTSQICVSAQGKSYELSRNAMKPVGFEVNDTILPYQ
AASFGGFKLLTEFFMFSERFNGFHFNFGDVLKQIDSHQFKLQIFIDELSVDFARSLSAERFSLFTTPIVNLHQMVSDPLD
VDFFKKQYPIILDANQGHNLELFSVDEVMDVTQVEPTKIAQIYGEKFNGSESGLRWQLVQTLHENGLLESALKVADLEHI
SAESESQTWLVNATVTDGMVTSHLSLLSEIECRESLTIPADIQLLRRPSLPMRSKETNKNVWTLLCHLHFNYHSILGSDD
PVETLKNVFDLYNHNQNPQNYAYIESVTTIEQEQVVAPIRISGKTCFAYGTKITITLDPTNVNGGICLFGHILERFFAYF
AGFNSFTQVNIKLKGQDELYMAFPRRSGCKILL

Sequences:

>Translated_593_residues
MSDTLLTYFEQELRFIREEASYFSARHPGATEALGIRKDSIDDPQISRLIESVAFLNGRLQQRLDDSFPEFTESLIRLLF
PHYLRPIPSYSLLDFVVNNDTNATHHIPSGTEFEVRDEQINSAIFRTTEEVALYPLKIERVNVSFAPFELEKPKGAEQSN
ALIEISISTVDDTVVLSELLIESLKLHFKGETNFALRLFDLLSQGTSQICVSAQGKSYELSRNAMKPVGFEVNDTILPYQ
AASFGGFKLLTEFFMFSERFNGFHFNFGDVLKQIDSHQFKLQIFIDELSVDFARSLSAERFSLFTTPIVNLHQMVSDPLD
VDFFKKQYPIILDANQGHNLELFSVDEVMDVTQVEPTKIAQIYGEKFNGSESGLRWQLVQTLHENGLLESALKVADLEHI
SAESESQTWLVNATVTDGMVTSHLSLLSEIECRESLTIPADIQLLRRPSLPMRSKETNKNVWTLLCHLHFNYHSILGSDD
PVETLKNVFDLYNHNQNPQNYAYIESVTTIEQEQVVAPIRISGKTCFAYGTKITITLDPTNVNGGICLFGHILERFFAYF
AGFNSFTQVNIKLKGQDELYMAFPRRSGCKILL
>Mature_592_residues
SDTLLTYFEQELRFIREEASYFSARHPGATEALGIRKDSIDDPQISRLIESVAFLNGRLQQRLDDSFPEFTESLIRLLFP
HYLRPIPSYSLLDFVVNNDTNATHHIPSGTEFEVRDEQINSAIFRTTEEVALYPLKIERVNVSFAPFELEKPKGAEQSNA
LIEISISTVDDTVVLSELLIESLKLHFKGETNFALRLFDLLSQGTSQICVSAQGKSYELSRNAMKPVGFEVNDTILPYQA
ASFGGFKLLTEFFMFSERFNGFHFNFGDVLKQIDSHQFKLQIFIDELSVDFARSLSAERFSLFTTPIVNLHQMVSDPLDV
DFFKKQYPIILDANQGHNLELFSVDEVMDVTQVEPTKIAQIYGEKFNGSESGLRWQLVQTLHENGLLESALKVADLEHIS
AESESQTWLVNATVTDGMVTSHLSLLSEIECRESLTIPADIQLLRRPSLPMRSKETNKNVWTLLCHLHFNYHSILGSDDP
VETLKNVFDLYNHNQNPQNYAYIESVTTIEQEQVVAPIRISGKTCFAYGTKITITLDPTNVNGGICLFGHILERFFAYFA
GFNSFTQVNIKLKGQDELYMAFPRRSGCKILL

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67377; Mature: 67246

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTLLTYFEQELRFIREEASYFSARHPGATEALGIRKDSIDDPQISRLIESVAFLNGRL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QQRLDDSFPEFTESLIRLLFPHYLRPIPSYSLLDFVVNNDTNATHHIPSGTEFEVRDEQI
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCEEECCCCCCEEECHHHH
NSAIFRTTEEVALYPLKIERVNVSFAPFELEKPKGAEQSNALIEISISTVDDTVVLSELL
HHHHHHCCHHHEEEEEEEEEEEEEECCEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
IESLKLHFKGETNFALRLFDLLSQGTSQICVSAQGKSYELSRNAMKPVGFEVNDTILPYQ
HHHHHEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCC
AASFGGFKLLTEFFMFSERFNGFHFNFGDVLKQIDSHQFKLQIFIDELSVDFARSLSAER
CCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHCCCEEEEEEEEEHHHHHHHHHCCHHH
FSLFTTPIVNLHQMVSDPLDVDFFKKQYPIILDANQGHNLELFSVDEVMDVTQVEPTKIA
HEEHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECCCCCCEEEEEHHHHHHHHCCCHHHHH
QIYGEKFNGSESGLRWQLVQTLHENGLLESALKVADLEHISAESESQTWLVNATVTDGMV
HHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHH
TSHLSLLSEIECRESLTIPADIQLLRRPSLPMRSKETNKNVWTLLCHLHFNYHSILGSDD
HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCC
PVETLKNVFDLYNHNQNPQNYAYIESVTTIEQEQVVAPIRISGKTCFAYGTKITITLDPT
HHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCHHHEEEEEEECCCEEEEECCEEEEEECCC
NVNGGICLFGHILERFFAYFAGFNSFTQVNIKLKGQDELYMAFPRRSGCKILL
CCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEECCCCCCEEEC
>Mature Secondary Structure 
SDTLLTYFEQELRFIREEASYFSARHPGATEALGIRKDSIDDPQISRLIESVAFLNGRL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QQRLDDSFPEFTESLIRLLFPHYLRPIPSYSLLDFVVNNDTNATHHIPSGTEFEVRDEQI
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCEEECCCCCCEEECHHHH
NSAIFRTTEEVALYPLKIERVNVSFAPFELEKPKGAEQSNALIEISISTVDDTVVLSELL
HHHHHHCCHHHEEEEEEEEEEEEEECCEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
IESLKLHFKGETNFALRLFDLLSQGTSQICVSAQGKSYELSRNAMKPVGFEVNDTILPYQ
HHHHHEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCC
AASFGGFKLLTEFFMFSERFNGFHFNFGDVLKQIDSHQFKLQIFIDELSVDFARSLSAER
CCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHCCCEEEEEEEEEHHHHHHHHHCCHHH
FSLFTTPIVNLHQMVSDPLDVDFFKKQYPIILDANQGHNLELFSVDEVMDVTQVEPTKIA
HEEHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECCCCCCEEEEEHHHHHHHHCCCHHHHH
QIYGEKFNGSESGLRWQLVQTLHENGLLESALKVADLEHISAESESQTWLVNATVTDGMV
HHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHH
TSHLSLLSEIECRESLTIPADIQLLRRPSLPMRSKETNKNVWTLLCHLHFNYHSILGSDD
HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCC
PVETLKNVFDLYNHNQNPQNYAYIESVTTIEQEQVVAPIRISGKTCFAYGTKITITLDPT
HHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCHHHEEEEEEECCCEEEEECCEEEEEECCC
NVNGGICLFGHILERFFAYFAGFNSFTQVNIKLKGQDELYMAFPRRSGCKILL
CCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEECCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA