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The map label for this gene is vasB-1

Identifier: 209694723

GI number: 209694723

Start: 1280466

End: 1281449

Strand: Direct

Name: vasB-1

Synonym: VSAL_I1176

Alternate gene names: NA

Gene position: 1280466-1281449 (Clockwise)

Preceding gene: 209694722

Following gene: 209694724

Centisome position: 38.51

GC content: 36.79

Gene sequence:

>984_bases
ATGCAAAATTTTGTTGTAGTACGTTTAAATAATAATCAACAAGATGTTGAGTTAGATAAAGCGTGGCAGCTATTTAAGCA
TCAAGCTGAGCATAATGGAGTTCGTCCGAATATAGCTTTTAGCGCAGAGCAACTGCCTGCGTATTACCAAACTCAAGTTA
CTGAAGTATACCGAAATAATATTGGTAATTATGTAATCAAGACGCCTTTAGCAGCTTTGTCGGGTTGTAAAGGAACGATA
CCAAGGCAAATGTATCGTCAGGTATTGAGTGCTCAATTTGATTTGGGTGATGAAGCACCAGTTGATTTCTTTGATGTATT
TAACAACCGCTATTTTCGTTTGTATTGCCAAGCAGAGTTGAAGCATGACTTAAGTAGTCAAGCTGAGGAAGAAACCTTTA
CATGGAACCTTCACCAGCAATCATTGACAACCATGCTATCGAGCTTATGTGGTCTTGGTGAAAATAATAGTGCGATTCCA
AAACAGGATTTAATTCAATATACCGGTTTATTGGGTTTGAAATTAACTTGTCCGTTTGCGCTCAAGTTATTGTTAGAAGA
CTATTTTGATGCTGAGTTTGTGATAAAAACAAGTGAGTTAGAGTACCAACCTTTAACGCCTTGTACATTAACGCAGTTAG
GTAAAATAGGACAGAATAGGCAGTTAGGTATGGGAGCACTCGTTGGAAAAAGTGCACCTATGGTTGGCCAAAAGTTACAT
ATTAAAGTGTGTCCACGAAATTATAGTCACTATATTAAGATTCGTAGTGATAGAAAAATGATTAGTGCCATTGAGCATTT
AGTACGAAGTTACATGGGAATTAACATTAAATATAAGCTTTACATGAAAGTGGATAGCCGATATTTGCCAAGAGTTCAAC
TAACTAGTAATGCAGACAAAGGCTTAAAAGTAGGTCAATCAGCCTGGATGAACAGTCGTTTAAACAAGCAACAGCATGTT
GAAATGCTACTAACAACAAGTTAA

Upstream 100 bases:

>100_bases
GCTTCTTTGCGTATTTTGCAGGGTTTAATAGTTTTACTCAGGTAAATATTAAGTTGAAGGGACAAGATGAGCTTTATATG
GCCTTTCCAAGGAGATCTGG

Downstream 100 bases:

>100_bases
TTAATTATGATAAATATTGAATTACAAAGTCTAGTAAAAAGATTAACCCCGGGGATGAAGGCTTCACTTGAAGCCGCAGC
AGGAGAATGTGTTCAGCGTG

Product: type VI secretion protein VasB-1

Products: NA

Alternate protein names: Type VI Secretion

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQNFVVVRLNNNQQDVELDKAWQLFKHQAEHNGVRPNIAFSAEQLPAYYQTQVTEVYRNNIGNYVIKTPLAALSGCKGTI
PRQMYRQVLSAQFDLGDEAPVDFFDVFNNRYFRLYCQAELKHDLSSQAEEETFTWNLHQQSLTTMLSSLCGLGENNSAIP
KQDLIQYTGLLGLKLTCPFALKLLLEDYFDAEFVIKTSELEYQPLTPCTLTQLGKIGQNRQLGMGALVGKSAPMVGQKLH
IKVCPRNYSHYIKIRSDRKMISAIEHLVRSYMGINIKYKLYMKVDSRYLPRVQLTSNADKGLKVGQSAWMNSRLNKQQHV
EMLLTTS

Sequences:

>Translated_327_residues
MQNFVVVRLNNNQQDVELDKAWQLFKHQAEHNGVRPNIAFSAEQLPAYYQTQVTEVYRNNIGNYVIKTPLAALSGCKGTI
PRQMYRQVLSAQFDLGDEAPVDFFDVFNNRYFRLYCQAELKHDLSSQAEEETFTWNLHQQSLTTMLSSLCGLGENNSAIP
KQDLIQYTGLLGLKLTCPFALKLLLEDYFDAEFVIKTSELEYQPLTPCTLTQLGKIGQNRQLGMGALVGKSAPMVGQKLH
IKVCPRNYSHYIKIRSDRKMISAIEHLVRSYMGINIKYKLYMKVDSRYLPRVQLTSNADKGLKVGQSAWMNSRLNKQQHV
EMLLTTS
>Mature_327_residues
MQNFVVVRLNNNQQDVELDKAWQLFKHQAEHNGVRPNIAFSAEQLPAYYQTQVTEVYRNNIGNYVIKTPLAALSGCKGTI
PRQMYRQVLSAQFDLGDEAPVDFFDVFNNRYFRLYCQAELKHDLSSQAEEETFTWNLHQQSLTTMLSSLCGLGENNSAIP
KQDLIQYTGLLGLKLTCPFALKLLLEDYFDAEFVIKTSELEYQPLTPCTLTQLGKIGQNRQLGMGALVGKSAPMVGQKLH
IKVCPRNYSHYIKIRSDRKMISAIEHLVRSYMGINIKYKLYMKVDSRYLPRVQLTSNADKGLKVGQSAWMNSRLNKQQHV
EMLLTTS

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37402; Mature: 37402

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNFVVVRLNNNQQDVELDKAWQLFKHQAEHNGVRPNIAFSAEQLPAYYQTQVTEVYRNN
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHCCHHHHHHHHHHHHHC
IGNYVIKTPLAALSGCKGTIPRQMYRQVLSAQFDLGDEAPVDFFDVFNNRYFRLYCQAEL
CCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEEEEHHH
KHDLSSQAEEETFTWNLHQQSLTTMLSSLCGLGENNSAIPKQDLIQYTGLLGLKLTCPFA
HHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEECHHH
LKLLLEDYFDAEFVIKTSELEYQPLTPCTLTQLGKIGQNRQLGMGALVGKSAPMVGQKLH
HHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEE
IKVCPRNYSHYIKIRSDRKMISAIEHLVRSYMGINIKYKLYMKVDSRYLPRVQLTSNADK
EEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEECCCCCC
GLKVGQSAWMNSRLNKQQHVEMLLTTS
CCHHHHHHHHHHHCCHHHHEEEEEECC
>Mature Secondary Structure
MQNFVVVRLNNNQQDVELDKAWQLFKHQAEHNGVRPNIAFSAEQLPAYYQTQVTEVYRNN
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHCCHHHHHHHHHHHHHC
IGNYVIKTPLAALSGCKGTIPRQMYRQVLSAQFDLGDEAPVDFFDVFNNRYFRLYCQAEL
CCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEEEEHHH
KHDLSSQAEEETFTWNLHQQSLTTMLSSLCGLGENNSAIPKQDLIQYTGLLGLKLTCPFA
HHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEECHHH
LKLLLEDYFDAEFVIKTSELEYQPLTPCTLTQLGKIGQNRQLGMGALVGKSAPMVGQKLH
HHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEE
IKVCPRNYSHYIKIRSDRKMISAIEHLVRSYMGINIKYKLYMKVDSRYLPRVQLTSNADK
EEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEECCCCCC
GLKVGQSAWMNSRLNKQQHVEMLLTTS
CCHHHHHHHHHHHCCHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA