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The map label for this gene is vasS-1

Identifier: 209694721

GI number: 209694721

Start: 1278288

End: 1278710

Strand: Direct

Name: vasS-1

Synonym: VSAL_I1174

Alternate gene names: NA

Gene position: 1278288-1278710 (Clockwise)

Preceding gene: 209694720

Following gene: 209694722

Centisome position: 38.44

GC content: 35.46

Gene sequence:

>423_bases
ATGAGCTTAATGGCGAAGTTAACTCAATCTTGGACTAATGATGTGGATGCGGTGCGTGATGCGATTATTGATAATATTTG
TGATCTTATTTCAAGTCGAGCTCCAATTTGGCCAACGTTAGAATCATCAGATGAATTGGCTGATACGATTGCCTATTCTG
GATTACGTAATATGACTCGTGCACAGAGTAAATCGAATAGTGATGTGATTATTGTTGATATTACTCATTTGATCCGTTGC
TATGAACCTAGGTTAATTGATGTCTTGATAGAAGTAGAAGAAAAAGAAAAATCAAAAAATCAATTACAGTTTCGTATTTC
TGCGACGATGTTATCTGACCAAGGCGAAGAAGCCATTGTATTGAATTCCTTTTTGGATCTAAGTCGAAACATATTGGATG
TAAGGAAATCAAATTTTGTCTGA

Upstream 100 bases:

>100_bases
TATGCGAAATCATGCTTCAGCCTCAGTATCAATATGAAATGATGGATGCTCAAGTATTATTAACAACTTCTATGCCTGAT
CAAGCAGTGGGAGGGTCTGC

Downstream 100 bases:

>100_bases
TACATTACTGACATATTTTGAACAAGAACTGCGCTTTATTCGAGAGGAAGCGTCGTATTTTTCAGCTCGTCATCCGGGAG
CTACAGAAGCACTCGGCATA

Product: type VI secretion protein VasS-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSLMAKLTQSWTNDVDAVRDAIIDNICDLISSRAPIWPTLESSDELADTIAYSGLRNMTRAQSKSNSDVIIVDITHLIRC
YEPRLIDVLIEVEEKEKSKNQLQFRISATMLSDQGEEAIVLNSFLDLSRNILDVRKSNFV

Sequences:

>Translated_140_residues
MSLMAKLTQSWTNDVDAVRDAIIDNICDLISSRAPIWPTLESSDELADTIAYSGLRNMTRAQSKSNSDVIIVDITHLIRC
YEPRLIDVLIEVEEKEKSKNQLQFRISATMLSDQGEEAIVLNSFLDLSRNILDVRKSNFV
>Mature_139_residues
SLMAKLTQSWTNDVDAVRDAIIDNICDLISSRAPIWPTLESSDELADTIAYSGLRNMTRAQSKSNSDVIIVDITHLIRCY
EPRLIDVLIEVEEKEKSKNQLQFRISATMLSDQGEEAIVLNSFLDLSRNILDVRKSNFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15846; Mature: 15715

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMAKLTQSWTNDVDAVRDAIIDNICDLISSRAPIWPTLESSDELADTIAYSGLRNMTR
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AQSKSNSDVIIVDITHLIRCYEPRLIDVLIEVEEKEKSKNQLQFRISATMLSDQGEEAIV
HHCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCHHHEEHHHHHHHHCCCCCCEEH
LNSFLDLSRNILDVRKSNFV
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLMAKLTQSWTNDVDAVRDAIIDNICDLISSRAPIWPTLESSDELADTIAYSGLRNMTR
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AQSKSNSDVIIVDITHLIRCYEPRLIDVLIEVEEKEKSKNQLQFRISATMLSDQGEEAIV
HHCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCHHHEEHHHHHHHHCCCCCCEEH
LNSFLDLSRNILDVRKSNFV
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA