Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694712

Identifier: 209694712

GI number: 209694712

Start: 1266064

End: 1266192

Strand: Direct

Name: 209694712

Synonym: VSAL_I1163

Alternate gene names: NA

Gene position: 1266064-1266192 (Clockwise)

Preceding gene: 209694710

Following gene: 209694713

Centisome position: 38.08

GC content: 35.66

Gene sequence:

>129_bases
ATGTACATCATCGTAGATAAAATTAAAAAGAGTGAGGAAATCGAACTTTATTGTGAGCAACCGCAAGGTATTGGACCAAT
ATTTTTGAGCTATTTGTCAGTAAATGCTAATAGGTGCGCAGCGTTATGA

Upstream 100 bases:

>100_bases
TAAATCAGCCTCAGAAATGGATTTTTTCACGCTCATAAGTCACTCATTATTAATGATATAAAAGAGGGATTTTAAGCTGA
ATTTACCGAAATCACAATTG

Downstream 100 bases:

>100_bases
TTGTATATATTGAGCAAAGTAATTGTCCATTACATTCCTTTAACAACTGTCCAAAGTGCGAGCGGTTAACATCAATTGTA
AAAAAAGTGGTTGACGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 42; Mature: 42

Protein sequence:

>42_residues
MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL

Sequences:

>Translated_42_residues
MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL
>Mature_42_residues
MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4762; Mature: 4762

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL
CEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL
CEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA