| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694712
Identifier: 209694712
GI number: 209694712
Start: 1266064
End: 1266192
Strand: Direct
Name: 209694712
Synonym: VSAL_I1163
Alternate gene names: NA
Gene position: 1266064-1266192 (Clockwise)
Preceding gene: 209694710
Following gene: 209694713
Centisome position: 38.08
GC content: 35.66
Gene sequence:
>129_bases ATGTACATCATCGTAGATAAAATTAAAAAGAGTGAGGAAATCGAACTTTATTGTGAGCAACCGCAAGGTATTGGACCAAT ATTTTTGAGCTATTTGTCAGTAAATGCTAATAGGTGCGCAGCGTTATGA
Upstream 100 bases:
>100_bases TAAATCAGCCTCAGAAATGGATTTTTTCACGCTCATAAGTCACTCATTATTAATGATATAAAAGAGGGATTTTAAGCTGA ATTTACCGAAATCACAATTG
Downstream 100 bases:
>100_bases TTGTATATATTGAGCAAAGTAATTGTCCATTACATTCCTTTAACAACTGTCCAAAGTGCGAGCGGTTAACATCAATTGTA AAAAAAGTGGTTGACGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL
Sequences:
>Translated_42_residues MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL >Mature_42_residues MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4762; Mature: 4762
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL CEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL CEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA