| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is trpE [H]
Identifier: 209694703
GI number: 209694703
Start: 1254941
End: 1256578
Strand: Reverse
Name: trpE [H]
Synonym: VSAL_I1154
Alternate gene names: 209694703
Gene position: 1256578-1254941 (Counterclockwise)
Preceding gene: 209694706
Following gene: 209694702
Centisome position: 37.79
GC content: 40.42
Gene sequence:
>1638_bases ATGCCAATACAAAAGAAATTAACAGAAGATCAACGAATTAGCAGAGAGGCTATGATGCAATCATCACACTCAAAAGATGG TCAGTTAGAATTACTTTGCCTTGAGGTACCCTACGTTTCCGACCCAACGGAATTGTATTCGACACTGTGTGCAAACCAAG CCATGAGCTTGTTACTTGAGTCTGCTGAAGTTGATTCAAAACAAAACCTAAAAAGCTTAATGTTGATTGATGCAGCAGTC CGTATTCATTGTTTCGATAAAATCGTTACTCTTGAAGCATTAACGAAAAACGGAGAAGCATTATTAAAAACATTACGTCT TTCTCTTCCTTCTTCGTTAGTTGATTTGATTTCCAGCTCGGTACTTAAGCTTCATTTTCCAGAGATTAATCAAGATTTAG ATGAAGACAGTCGCCTAAGAGAGCTTTCTTCTTTTGATGCATTACGCTTTATCCAAAACCAATTCGATTTGACCGGATTA CCGTCAAATGCACTCTTTTTGGGTGGTTTATTTGCTTATGACTTAGTGGCAAATTTTGAACAACTAGGCAGTGCAGAAAC AACCAACAAATGTCCTGATTACCTATTTTATATTGCAGAATCTTTACTCGTCATAGACCATCAAACAAAAACATCGACAG TACAAGGCTCTATATTTACAAAAGAGCCAGCAATCAAACAAAACATATCGACTCGTTTAGAAGCTATTAATGTTTTTTGT TCAGAACCTCACACCTTGCCTGATGCTCCAATATTAGATCGTTGTGAAGCTCTTCCAAGTGTCTCTGATGAAGATTTTTG TCAAACGGTTCTGGATTTAAAAGAATACGTTATTAGAGGCGACGTATTTCAGGTGGTTCCATCTCGTCGCTTTACGCTTC CTTGCCCTGCGCCGCTTTCTGCTTACCGAGAGTTAAAAATCGGCAACCCAAGTCCTTACATGTTCTACCTGCAAGATCGT GATTTTACTTTATTTGGGGCTTCTCCTGAGTCTGCGTTAAAATATTGTAAAGACAGCAATCAAGTCGAAATTTACCCAAT AGCAGGGACTCGCCAGCGTGGGAAAAATAACGATGGTTCAATTAATTATGACTTAGATAGCCGTATTGAATTGGAATTAC GTTGTGATACCAAAGAAAACGCAGAACACATGATGTTGGTGGATCTTGCTCGAAATGACGTAGCTCGAATTTCAGCCCCT GGTACAAGATACGTTGCTGATTTATTAAAAGTCGATCGCTACAGCCACGTAATGCATTTAGTTTCTCGTGTTGTTGGACA GCTACGAGGGGATCTTGATGCCCTTCATGCTTATCAAGCGTGTATGAACATGGGGACCTTAACAGGCGCCCCTAAAATTC GAGCAATGCAATTAATCCGTGATGTAGAAAAAACACGTCGTGGAACTTATGGTGGTGCCGTTGGTTATTTAACGGGTGAT GGCCACATGGATACTTGTATCGTTATTCGCTCTGCTTATGTAGAAGATGGCATAGCTCAAGTTCAAGCCGGTGCAGGGGT CGTTTATGATTCTCATCCACAAGCTGAAGCAGATGAAACACGAGGTAAAGCTCAAGCCGTTATCTCTGCAATTCAAAAGG CGCACCTTGCATCACAGAAAGCAAAGGAGAAAAACTAA
Upstream 100 bases:
>100_bases TAAAAGAGAAAATACAACATCGATGAAATAGTAAACATTCAGTAATTTAGCCCTCATAAGTTTTAACAAAAGAGTGGCAA CAACAGTGAAATATGCGACT
Downstream 100 bases:
>100_bases TGACTCATATCGTATTACTGGATAATTTTGACTCCTTTACTTACAACCTTGTCGATCAGTTTCGCTCACTTGGTTACCCT GTAACTATATATCGAAACAG
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MPIQKKLTEDQRISREAMMQSSHSKDGQLELLCLEVPYVSDPTELYSTLCANQAMSLLLESAEVDSKQNLKSLMLIDAAV RIHCFDKIVTLEALTKNGEALLKTLRLSLPSSLVDLISSSVLKLHFPEINQDLDEDSRLRELSSFDALRFIQNQFDLTGL PSNALFLGGLFAYDLVANFEQLGSAETTNKCPDYLFYIAESLLVIDHQTKTSTVQGSIFTKEPAIKQNISTRLEAINVFC SEPHTLPDAPILDRCEALPSVSDEDFCQTVLDLKEYVIRGDVFQVVPSRRFTLPCPAPLSAYRELKIGNPSPYMFYLQDR DFTLFGASPESALKYCKDSNQVEIYPIAGTRQRGKNNDGSINYDLDSRIELELRCDTKENAEHMMLVDLARNDVARISAP GTRYVADLLKVDRYSHVMHLVSRVVGQLRGDLDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGTYGGAVGYLTGD GHMDTCIVIRSAYVEDGIAQVQAGAGVVYDSHPQAEADETRGKAQAVISAIQKAHLASQKAKEKN
Sequences:
>Translated_545_residues MPIQKKLTEDQRISREAMMQSSHSKDGQLELLCLEVPYVSDPTELYSTLCANQAMSLLLESAEVDSKQNLKSLMLIDAAV RIHCFDKIVTLEALTKNGEALLKTLRLSLPSSLVDLISSSVLKLHFPEINQDLDEDSRLRELSSFDALRFIQNQFDLTGL PSNALFLGGLFAYDLVANFEQLGSAETTNKCPDYLFYIAESLLVIDHQTKTSTVQGSIFTKEPAIKQNISTRLEAINVFC SEPHTLPDAPILDRCEALPSVSDEDFCQTVLDLKEYVIRGDVFQVVPSRRFTLPCPAPLSAYRELKIGNPSPYMFYLQDR DFTLFGASPESALKYCKDSNQVEIYPIAGTRQRGKNNDGSINYDLDSRIELELRCDTKENAEHMMLVDLARNDVARISAP GTRYVADLLKVDRYSHVMHLVSRVVGQLRGDLDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGTYGGAVGYLTGD GHMDTCIVIRSAYVEDGIAQVQAGAGVVYDSHPQAEADETRGKAQAVISAIQKAHLASQKAKEKN >Mature_544_residues PIQKKLTEDQRISREAMMQSSHSKDGQLELLCLEVPYVSDPTELYSTLCANQAMSLLLESAEVDSKQNLKSLMLIDAAVR IHCFDKIVTLEALTKNGEALLKTLRLSLPSSLVDLISSSVLKLHFPEINQDLDEDSRLRELSSFDALRFIQNQFDLTGLP SNALFLGGLFAYDLVANFEQLGSAETTNKCPDYLFYIAESLLVIDHQTKTSTVQGSIFTKEPAIKQNISTRLEAINVFCS EPHTLPDAPILDRCEALPSVSDEDFCQTVLDLKEYVIRGDVFQVVPSRRFTLPCPAPLSAYRELKIGNPSPYMFYLQDRD FTLFGASPESALKYCKDSNQVEIYPIAGTRQRGKNNDGSINYDLDSRIELELRCDTKENAEHMMLVDLARNDVARISAPG TRYVADLLKVDRYSHVMHLVSRVVGQLRGDLDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGTYGGAVGYLTGDG HMDTCIVIRSAYVEDGIAQVQAGAGVVYDSHPQAEADETRGKAQAVISAIQKAHLASQKAKEKN
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=515, Percent_Identity=58.252427184466, Blast_Score=581, Evalue=1e-167, Organism=Escherichia coli, GI1788114, Length=370, Percent_Identity=30.8108108108108, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1786809, Length=215, Percent_Identity=29.7674418604651, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=406, Percent_Identity=35.9605911330049, Blast_Score=230, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6324361, Length=392, Percent_Identity=25.2551020408163, Blast_Score=88, Evalue=3e-18,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 60532; Mature: 60400
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQKKLTEDQRISREAMMQSSHSKDGQLELLCLEVPYVSDPTELYSTLCANQAMSLLLE CCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH SAEVDSKQNLKSLMLIDAAVRIHCFDKIVTLEALTKNGEALLKTLRLSLPSSLVDLISSS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHH VLKLHFPEINQDLDEDSRLRELSSFDALRFIQNQFDLTGLPSNALFLGGLFAYDLVANFE HEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH QLGSAETTNKCPDYLFYIAESLLVIDHQTKTSTVQGSIFTKEPAIKQNISTRLEAINVFC HHCCCCCCCCCHHHHHHHHHHHHEEECCCCCCEECCCEECCCCHHHHHHHHHHHHHHHHH SEPHTLPDAPILDRCEALPSVSDEDFCQTVLDLKEYVIRGDVFQVVPSRRFTLPCPAPLS CCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCEECCCCCCHH AYRELKIGNPSPYMFYLQDRDFTLFGASPESALKYCKDSNQVEIYPIAGTRQRGKNNDGS HHHEEECCCCCCEEEEEECCCEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC INYDLDSRIELELRCDTKENAEHMMLVDLARNDVARISAPGTRYVADLLKVDRYSHVMHL EEECCCCEEEEEEEECCCCCCCEEEEEEEHHCCHHEECCCCHHHHHHHHHHHHHHHHHHH VSRVVGQLRGDLDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGTYGGAVGYLTGD HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECC GHMDTCIVIRSAYVEDGIAQVQAGAGVVYDSHPQAEADETRGKAQAVISAIQKAHLASQK CCCCHHEEEHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AKEKN HCCCC >Mature Secondary Structure PIQKKLTEDQRISREAMMQSSHSKDGQLELLCLEVPYVSDPTELYSTLCANQAMSLLLE CCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH SAEVDSKQNLKSLMLIDAAVRIHCFDKIVTLEALTKNGEALLKTLRLSLPSSLVDLISSS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHH VLKLHFPEINQDLDEDSRLRELSSFDALRFIQNQFDLTGLPSNALFLGGLFAYDLVANFE HEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH QLGSAETTNKCPDYLFYIAESLLVIDHQTKTSTVQGSIFTKEPAIKQNISTRLEAINVFC HHCCCCCCCCCHHHHHHHHHHHHEEECCCCCCEECCCEECCCCHHHHHHHHHHHHHHHHH SEPHTLPDAPILDRCEALPSVSDEDFCQTVLDLKEYVIRGDVFQVVPSRRFTLPCPAPLS CCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCEECCCCCCHH AYRELKIGNPSPYMFYLQDRDFTLFGASPESALKYCKDSNQVEIYPIAGTRQRGKNNDGS HHHEEECCCCCCEEEEEECCCEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC INYDLDSRIELELRCDTKENAEHMMLVDLARNDVARISAPGTRYVADLLKVDRYSHVMHL EEECCCCEEEEEEEECCCCCCCEEEEEEEHHCCHHEECCCCHHHHHHHHHHHHHHHHHHH VSRVVGQLRGDLDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGTYGGAVGYLTGD HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECC GHMDTCIVIRSAYVEDGIAQVQAGAGVVYDSHPQAEADETRGKAQAVISAIQKAHLASQK CCCCHHEEEHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AKEKN HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1773058; 12620739 [H]