| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is trpG [H]
Identifier: 209694702
GI number: 209694702
Start: 1254333
End: 1254941
Strand: Reverse
Name: trpG [H]
Synonym: VSAL_I1153
Alternate gene names: 209694702
Gene position: 1254941-1254333 (Counterclockwise)
Preceding gene: 209694703
Following gene: 209694701
Centisome position: 37.74
GC content: 41.87
Gene sequence:
>609_bases ATGACTCATATCGTATTACTGGATAATTTTGACTCCTTTACTTACAACCTTGTCGATCAGTTTCGCTCACTTGGTTACCC TGTAACTATATATCGAAACAGTTTATCTGCGATAGCATTTGAAGACGCGGTCACTAAATTAGAAAACCCTGTTGTTGTAT TATCCCCGGGGCCTGGTGCCCCATCAGAAGCAGGTTGCATGCCTGACGTTATTCAGCGCTTAAAAGGCAAAGTTCCGATG ATAGGGATTTGTCTTGGTCATCAAGCCATCGTTGAAGCGTACGACGGCATTGTCGCTGGTGCGGGTGAAATTGTTCATGG TAAATCAGCCATGATGACACATAACCAACACGCCATTTTTGATGGATTACCAAATCCACTTTCTATTGCTCGTTACCACT CTCTTGTTGCCACTAAAGTTACCAAGCAATTAACAGTAACGGCAACGGTTGACGATTTAGTTATGGCGGTCATTCAAGAA GAAGATAAAGTGTGTGGGTTTCAGTTTCATCCCGAATCCATTCTCACTACGCAAGGCGAACAACTTTTAATTAATACCTT GAATTGGGCACTCGATATCACTCAATCCCATTCAGAAAATAAAGAATAA
Upstream 100 bases:
>100_bases CACAAGCTGAAGCAGATGAAACACGAGGTAAAGCTCAAGCCGTTATCTCTGCAATTCAAAAGGCGCACCTTGCATCACAG AAAGCAAAGGAGAAAAACTA
Downstream 100 bases:
>100_bases GGATATTCTCATGACTCAAATTGAAGCCATTTTTAATAAGCTATACAGCCAAGTTTCTCTTTCAGAAACTGAGAGCCAAA TTCTATTTGATGCCATCATC
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTHIVLLDNFDSFTYNLVDQFRSLGYPVTIYRNSLSAIAFEDAVTKLENPVVVLSPGPGAPSEAGCMPDVIQRLKGKVPM IGICLGHQAIVEAYDGIVAGAGEIVHGKSAMMTHNQHAIFDGLPNPLSIARYHSLVATKVTKQLTVTATVDDLVMAVIQE EDKVCGFQFHPESILTTQGEQLLINTLNWALDITQSHSENKE
Sequences:
>Translated_202_residues MTHIVLLDNFDSFTYNLVDQFRSLGYPVTIYRNSLSAIAFEDAVTKLENPVVVLSPGPGAPSEAGCMPDVIQRLKGKVPM IGICLGHQAIVEAYDGIVAGAGEIVHGKSAMMTHNQHAIFDGLPNPLSIARYHSLVATKVTKQLTVTATVDDLVMAVIQE EDKVCGFQFHPESILTTQGEQLLINTLNWALDITQSHSENKE >Mature_201_residues THIVLLDNFDSFTYNLVDQFRSLGYPVTIYRNSLSAIAFEDAVTKLENPVVVLSPGPGAPSEAGCMPDVIQRLKGKVPMI GICLGHQAIVEAYDGIVAGAGEIVHGKSAMMTHNQHAIFDGLPNPLSIARYHSLVATKVTKQLTVTATVDDLVMAVIQEE DKVCGFQFHPESILTTQGEQLLINTLNWALDITQSHSENKE
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=190, Percent_Identity=60, Blast_Score=247, Evalue=3e-67, Organism=Escherichia coli, GI1789760, Length=188, Percent_Identity=44.1489361702128, Blast_Score=156, Evalue=8e-40, Organism=Saccharomyces cerevisiae, GI6322638, Length=195, Percent_Identity=41.025641025641, Blast_Score=147, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6324361, Length=209, Percent_Identity=28.2296650717703, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 21987; Mature: 21856
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHIVLLDNFDSFTYNLVDQFRSLGYPVTIYRNSLSAIAFEDAVTKLENPVVVLSPGPGA CEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC PSEAGCMPDVIQRLKGKVPMIGICLGHQAIVEAYDGIVAGAGEIVHGKSAMMTHNQHAIF CCCCCCCHHHHHHHCCCCCEEEEEECHHHHHHHHCCEEECCCCEEECCCCEEECCCCCEE DGLPNPLSIARYHSLVATKVTKQLTVTATVDDLVMAVIQEEDKVCGFQFHPESILTTQGE CCCCCHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHCCCCCCCEEECCCHHHHCCCC QLLINTLNWALDITQSHSENKE EEEEEEHHHEEEECCCCCCCCC >Mature Secondary Structure THIVLLDNFDSFTYNLVDQFRSLGYPVTIYRNSLSAIAFEDAVTKLENPVVVLSPGPGA EEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC PSEAGCMPDVIQRLKGKVPMIGICLGHQAIVEAYDGIVAGAGEIVHGKSAMMTHNQHAIF CCCCCCCHHHHHHHCCCCCEEEEEECHHHHHHHHCCEEECCCCEEECCCCEEECCCCCEE DGLPNPLSIARYHSLVATKVTKQLTVTATVDDLVMAVIQEEDKVCGFQFHPESILTTQGE CCCCCHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHCCCCCCCEEECCCHHHHCCCC QLLINTLNWALDITQSHSENKE EEEEEEHHHEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]