Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is hisB [H]

Identifier: 209694686

GI number: 209694686

Start: 1239808

End: 1240881

Strand: Direct

Name: hisB [H]

Synonym: VSAL_I1136

Alternate gene names: 209694686

Gene position: 1239808-1240881 (Clockwise)

Preceding gene: 209694685

Following gene: 209694687

Centisome position: 37.29

GC content: 41.62

Gene sequence:

>1074_bases
GTGAGCAAACAACAAAAGATTTTATTTATCGACCGTGACGGCACCTTAATTGTTGAGCCGCCTGTCGATTTTCAAGTAGA
CCGTTTAGATAAGTTAAAATTCGAGCCTCTGGTTATTTCTTCTCTGTTGTTTCTTCAAGAAGCGGGTTACCGTTTAGTCA
TGGTAACCAACCAAGATGGTTTGGGTACAGATAGCTATCCACAAGATGAGTTTGATGCGCCACACAATATGATGATGGAG
TTCTTTGAATCTCAAGGTGTGAAGTTTGATGACGTTCTTATCTGTCCTCACTTTGAAGAAGATAACTGCTCATGCCGTAA
ACCAAAATTGGGTATGGTAAAAGAGTACCTTCAAGGTGGAAAAGTTGATTTTCAACATTCAGTTGTGATTGGTGATCGCC
AAACGGATCTTCAATTGGCTGAGAACATGGCAATCCGTGGTATCCAATATCACCCTGAGACAATGAACTGGCCTGCGATC
TTAAAAGATCTGACGGTAAATGCAGGTACTGCAGAAGTGATTCGTACAACTAAAGAAACTGACATTAAAGTGTTTGTTAA
TCTGGATGAGCAGGGCGGAAATGAGATCTCAACGGGTCTTGGCTTCTTTGACCACATGCTTGATCAAATTGCTACGCACG
GCGGTTTCCAAATGAAGATCAATGTCGACGGTGACTTACACATTGATGATCACCACACCATTGAAGATACAGCGCTTGCA
TTAGGTGAAGCGTTAAAAGAAGCGTTAGGTGACAAACGTGGCATTGGTCGCTTTGGTTTCAGCTTACCAATGGATGAGTG
TTTAGCGCAATGTGCGTTAGATTTATCTGGTCGCCCATACCTAAAATTTGATGCTGAATTTAGTCGTGATCAAGTGGGAG
ATTTATCAACAGAAATGGTGGTTCACTTCTTCCGTTCACTTACTGATACATTAGCTTGTACATTGCACCTTTCTTCTGCC
GGTCATAATGACCACCACATTATTGAAAGCTTATTTAAAGCCTTTGGCCGTACTTTACGCCAAGCAATTAAAGTGGAAGG
TAATGAACTACCAAGCTCAAAAGGCGTATTGTAG

Upstream 100 bases:

>100_bases
TTATTCGTAACCAATTAATGTGATTTTATCCCCGAAAGCTTAGGAATAAGGCTTGGGGCTTATCAAGAATAAAACAAGAA
AAAATTAAAAGGAAGTTCCT

Downstream 100 bases:

>100_bases
GAGTGACTATGACAAAGCAAAATGTCGTTATTATTGATACAGGCTGCTCTAACGTATCGTCAGTGAGATTTGCGATTGAG
CGTTTGGGTTATGACGTTAC

Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase

Products: NA

Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD [H]

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKFEPLVISSLLFLQEAGYRLVMVTNQDGLGTDSYPQDEFDAPHNMMME
FFESQGVKFDDVLICPHFEEDNCSCRKPKLGMVKEYLQGGKVDFQHSVVIGDRQTDLQLAENMAIRGIQYHPETMNWPAI
LKDLTVNAGTAEVIRTTKETDIKVFVNLDEQGGNEISTGLGFFDHMLDQIATHGGFQMKINVDGDLHIDDHHTIEDTALA
LGEALKEALGDKRGIGRFGFSLPMDECLAQCALDLSGRPYLKFDAEFSRDQVGDLSTEMVVHFFRSLTDTLACTLHLSSA
GHNDHHIIESLFKAFGRTLRQAIKVEGNELPSSKGVL

Sequences:

>Translated_357_residues
MSKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKFEPLVISSLLFLQEAGYRLVMVTNQDGLGTDSYPQDEFDAPHNMMME
FFESQGVKFDDVLICPHFEEDNCSCRKPKLGMVKEYLQGGKVDFQHSVVIGDRQTDLQLAENMAIRGIQYHPETMNWPAI
LKDLTVNAGTAEVIRTTKETDIKVFVNLDEQGGNEISTGLGFFDHMLDQIATHGGFQMKINVDGDLHIDDHHTIEDTALA
LGEALKEALGDKRGIGRFGFSLPMDECLAQCALDLSGRPYLKFDAEFSRDQVGDLSTEMVVHFFRSLTDTLACTLHLSSA
GHNDHHIIESLFKAFGRTLRQAIKVEGNELPSSKGVL
>Mature_356_residues
SKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKFEPLVISSLLFLQEAGYRLVMVTNQDGLGTDSYPQDEFDAPHNMMMEF
FESQGVKFDDVLICPHFEEDNCSCRKPKLGMVKEYLQGGKVDFQHSVVIGDRQTDLQLAENMAIRGIQYHPETMNWPAIL
KDLTVNAGTAEVIRTTKETDIKVFVNLDEQGGNEISTGLGFFDHMLDQIATHGGFQMKINVDGDLHIDDHHTIEDTALAL
GEALKEALGDKRGIGRFGFSLPMDECLAQCALDLSGRPYLKFDAEFSRDQVGDLSTEMVVHFFRSLTDTLACTLHLSSAG
HNDHHIIESLFKAFGRTLRQAIKVEGNELPSSKGVL

Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]

COG id: COG0131

COG function: function code E; Imidazoleglycerol-phosphate dehydratase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family [H]

Homologues:

Organism=Escherichia coli, GI87082027, Length=353, Percent_Identity=69.4050991501417, Blast_Score=511, Evalue=1e-146,
Organism=Escherichia coli, GI1786399, Length=150, Percent_Identity=30.6666666666667, Blast_Score=73, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324776, Length=165, Percent_Identity=48.4848484848485, Blast_Score=160, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR006549
- InterPro:   IPR020566
- InterPro:   IPR005954
- InterPro:   IPR006543
- InterPro:   IPR000807
- InterPro:   IPR020565
- InterPro:   IPR013954
- InterPro:   IPR020568 [H]

Pfam domain/function: PF00475 IGPD; PF08645 PNK3P [H]

EC number: =3.1.3.15; =4.2.1.19 [H]

Molecular weight: Translated: 39968; Mature: 39837

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKFEPLVISSLLFLQEAGYRLVMVTNQDG
CCCCCEEEEEECCCCEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCC
LGTDSYPQDEFDAPHNMMMEFFESQGVKFDDVLICPHFEEDNCSCRKPKLGMVKEYLQGG
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCC
KVDFQHSVVIGDRQTDLQLAENMAIRGIQYHPETMNWPAILKDLTVNAGTAEVIRTTKET
CCEEEEEEEECCCCHHHHHHHHHHHCCEEECCCCCCCHHHHHHHCCCCCCHHHHHCCCCC
DIKVFVNLDEQGGNEISTGLGFFDHMLDQIATHGGFQMKINVDGDLHIDDHHTIEDTALA
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCHHHHHHH
LGEALKEALGDKRGIGRFGFSLPMDECLAQCALDLSGRPYLKFDAEFSRDQVGDLSTEMV
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCHHHHHH
VHFFRSLTDTLACTLHLSSAGHNDHHIIESLFKAFGRTLRQAIKVEGNELPSSKGVL
HHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKFEPLVISSLLFLQEAGYRLVMVTNQDG
CCCCEEEEEECCCCEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCC
LGTDSYPQDEFDAPHNMMMEFFESQGVKFDDVLICPHFEEDNCSCRKPKLGMVKEYLQGG
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCC
KVDFQHSVVIGDRQTDLQLAENMAIRGIQYHPETMNWPAILKDLTVNAGTAEVIRTTKET
CCEEEEEEEECCCCHHHHHHHHHHHCCEEECCCCCCCHHHHHHHCCCCCCHHHHHCCCCC
DIKVFVNLDEQGGNEISTGLGFFDHMLDQIATHGGFQMKINVDGDLHIDDHHTIEDTALA
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCHHHHHHH
LGEALKEALGDKRGIGRFGFSLPMDECLAQCALDLSGRPYLKFDAEFSRDQVGDLSTEMV
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCHHHHHH
VHFFRSLTDTLACTLHLSSAGHNDHHIIESLFKAFGRTLRQAIKVEGNELPSSKGVL
HHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]