Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694577

Identifier: 209694577

GI number: 209694577

Start: 1115754

End: 1115882

Strand: Direct

Name: 209694577

Synonym: VSAL_I1016

Alternate gene names: NA

Gene position: 1115754-1115882 (Clockwise)

Preceding gene: 209694576

Following gene: 209694578

Centisome position: 33.55

GC content: 41.86

Gene sequence:

>129_bases
ATGAACAAAGATAAGTTCTTAGCGAAGATGTCCATTGCATTTATGCAGAACCACGGCGTTGCACCAACCGAAAGCCAATT
AGATGGCTGGTTAGAAGTGTATGCAGTACTTGAAAGTAAAGGGGAATAG

Upstream 100 bases:

>100_bases
TTTCTTCTTCGTGCCGTTCGGTTGCCCAGCAATCAATGATGCAAACATGGTGGCGTGATTTTGAGCCAGAACACGGCTCG
CCAATGTTGGAGTCAATCTA

Downstream 100 bases:

>100_bases
AGATGAGTAAATCATGTAATTGTTTTGAAGAAACCCGCAATAAAGCAAAAGAACATATTAGAGCTAAGTTACCAAGAGAC
ATCGTTGATTTTTCTGTAAG

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 42; Mature: 42

Protein sequence:

>42_residues
MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE

Sequences:

>Translated_42_residues
MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE
>Mature_42_residues
MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4714; Mature: 4714

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA