Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694576

Identifier: 209694576

GI number: 209694576

Start: 1115353

End: 1115754

Strand: Direct

Name: 209694576

Synonym: VSAL_I1015

Alternate gene names: NA

Gene position: 1115353-1115754 (Clockwise)

Preceding gene: 209694575

Following gene: 209694577

Centisome position: 33.54

GC content: 42.54

Gene sequence:

>402_bases
ATGAGTGTTATTTCTGTATATCAAGCTGATCTAGAATTTGCCCTTCGTGGTGCAGGTTTTACCTCTCGAAAAATCAACAT
GTTCTTAAAAGCATTTAACAAAGAAACCGTATCACAAGGCGTGATTTGCTCGCTTGATTCACAACGCGCCATGCTTGTGA
ATGTTAACGGTACTGAGCAAGGTTTATGTCTTTCTGATTTTATCACTGCTTGGTGGTCGTTTTGGGTTGTGGTTTTTGAT
ACGACAAATAACCCTGATTTAGAGCAGCAATCCCTTGGCGCTATTCGTGCCCTTTTCTTTATTTCTTCTTCGTGCCGTTC
GGTTGCCCAGCAATCAATGATGCAAACATGGTGGCGTGATTTTGAGCCAGAACACGGCTCGCCAATGTTGGAGTCAATCT
AA

Upstream 100 bases:

>100_bases
CTGATTTGAGTGAATCTAATGCACTTGCGCGATGTATTCAAATAGAAAGCAAATTTGCTGAACTTATCATTGAAGCAAAA
GACAACGCAGAGGTAACGGC

Downstream 100 bases:

>100_bases
TGAACAAAGATAAGTTCTTAGCGAAGATGTCCATTGCATTTATGCAGAACCACGGCGTTGCACCAACCGAAAGCCAATTA
GATGGCTGGTTAGAAGTGTA

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSVISVYQADLEFALRGAGFTSRKINMFLKAFNKETVSQGVICSLDSQRAMLVNVNGTEQGLCLSDFITAWWSFWVVVFD
TTNNPDLEQQSLGAIRALFFISSSCRSVAQQSMMQTWWRDFEPEHGSPMLESI

Sequences:

>Translated_133_residues
MSVISVYQADLEFALRGAGFTSRKINMFLKAFNKETVSQGVICSLDSQRAMLVNVNGTEQGLCLSDFITAWWSFWVVVFD
TTNNPDLEQQSLGAIRALFFISSSCRSVAQQSMMQTWWRDFEPEHGSPMLESI
>Mature_132_residues
SVISVYQADLEFALRGAGFTSRKINMFLKAFNKETVSQGVICSLDSQRAMLVNVNGTEQGLCLSDFITAWWSFWVVVFDT
TNNPDLEQQSLGAIRALFFISSSCRSVAQQSMMQTWWRDFEPEHGSPMLESI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15031; Mature: 14900

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVISVYQADLEFALRGAGFTSRKINMFLKAFNKETVSQGVICSLDSQRAMLVNVNGTEQ
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHCCCCEEEECCCCEEEEEECCCCC
GLCLSDFITAWWSFWVVVFDTTNNPDLEQQSLGAIRALFFISSSCRSVAQQSMMQTWWRD
CCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FEPEHGSPMLESI
CCCCCCCCHHHCC
>Mature Secondary Structure 
SVISVYQADLEFALRGAGFTSRKINMFLKAFNKETVSQGVICSLDSQRAMLVNVNGTEQ
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHCCCCEEEECCCCEEEEEECCCCC
GLCLSDFITAWWSFWVVVFDTTNNPDLEQQSLGAIRALFFISSSCRSVAQQSMMQTWWRD
CCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FEPEHGSPMLESI
CCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA