The gene/protein map for NC_002942 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is ybfF [C]

Identifier: 209694484

GI number: 209694484

Start: 1013608

End: 1014405

Strand: Reverse

Name: ybfF [C]

Synonym: VSAL_I0913

Alternate gene names: 209694484

Gene position: 1014405-1013608 (Counterclockwise)

Preceding gene: 209694485

Following gene: 209694482

Centisome position: 30.51

GC content: 36.09

Gene sequence:

>798_bases
ATGTCTAATTCTTTGTTATTCCATAAAACCTATGAACATGAATCAAGCTCAAAGTGGGTTGTATTTGTTCATGGAGCAGG
TGGAAGTTCCACTACATGGTTCAAACAAATCGCTGCTTTTAGAAAGAATTTTAATATTTTGCTTATTGATTTACGTGGCC
ACGGTCGCTCAAGTCACTTCTCACAATTAAAAGAATTCATTAATAAACAGTATTCTTTTAAGGTCGTAAGCCAAGATATT
ATCGATGTCCTTGATCACCTTAATATTAAATCAGCACATTTTGTTGGTATGTCTCTTGGCACCATCATTATTCGTAACCT
AGCGGAACTGGCACAAGACAGAGTCAGTTCGATGGTATTAGCCGGTGCAATTACGCGTTTTAATTTCCGCTCTCAGTTTT
TGATTAAAATGGGCGATATTACTAAAAATATCATGCCTTATATGTGGCTGTATAAATTGTTTGCTTATGTTGTCATGCCA
CAAAAAAGCCAAAAAGAATCGCGTCATATTTTCACCAGAGAAGCTAAGAAATTATGCCAGAAAGAGTTTAAACGTTGGTT
TAAATTAGCTGCGGATGTGAATCCATTAATGCGCTGTTTTAAAGATAAAGAATTACCAATCCCCACGTTGTATGTCATGG
GTGAAAATGACTACATGTTCATGAAACCAGTACAAGAAATGGTTGCGGTACATGAACACAGTCATTTATTGCAAATTCCA
GAATGTGGTCACGTATGTAATATCGACAGGCCGAGAGAATTTAATAAACACGCGATAGAGTTTATTACTGCACAATAA

Upstream 100 bases:

>100_bases
ATGTCAGATTTCTATCAGTCTACTTCCTTGTGAGTATTCATCGTTGATATAGGATGGTATAGTCTGACTCCATATCTTTC
TCATATTAAAAGTAGAGTGA

Downstream 100 bases:

>100_bases
TTGAATTCAAATTAAGAACAAATAAAAACGGAGATCATGATGATCTCCGTTTTTTTGTATTTACGACATTATTTAAAGAA
TAACGGTCTTATTACCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Beta-Ketoadipate Enol-Lactone Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase; 3-Oxoadipate Enol-Lactonase; Hydrolase; Arylesterase; 2-Hydroxy-6-Ketonona-2 4-Dienedoic Acid Hydrolase; Alpha/Beta Fold Superfamily Hydrolase; Tetranactin Resistance Protein; Oxidoreductase; 3-Oxoadipate Enol-Lactone Hydrolase; Hydrolase Or Acyltransferase-Like Protein; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Family Hydrolase; 3-Oxoadipate Enol-Lactonase II

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSNSLLFHKTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFNILLIDLRGHGRSSHFSQLKEFINKQYSFKVVSQDI
IDVLDHLNIKSAHFVGMSLGTIIIRNLAELAQDRVSSMVLAGAITRFNFRSQFLIKMGDITKNIMPYMWLYKLFAYVVMP
QKSQKESRHIFTREAKKLCQKEFKRWFKLAADVNPLMRCFKDKELPIPTLYVMGENDYMFMKPVQEMVAVHEHSHLLQIP
ECGHVCNIDRPREFNKHAIEFITAQ

Sequences:

>Translated_265_residues
MSNSLLFHKTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFNILLIDLRGHGRSSHFSQLKEFINKQYSFKVVSQDI
IDVLDHLNIKSAHFVGMSLGTIIIRNLAELAQDRVSSMVLAGAITRFNFRSQFLIKMGDITKNIMPYMWLYKLFAYVVMP
QKSQKESRHIFTREAKKLCQKEFKRWFKLAADVNPLMRCFKDKELPIPTLYVMGENDYMFMKPVQEMVAVHEHSHLLQIP
ECGHVCNIDRPREFNKHAIEFITAQ
>Mature_264_residues
SNSLLFHKTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFNILLIDLRGHGRSSHFSQLKEFINKQYSFKVVSQDII
DVLDHLNIKSAHFVGMSLGTIIIRNLAELAQDRVSSMVLAGAITRFNFRSQFLIKMGDITKNIMPYMWLYKLFAYVVMPQ
KSQKESRHIFTREAKKLCQKEFKRWFKLAADVNPLMRCFKDKELPIPTLYVMGENDYMFMKPVQEMVAVHEHSHLLQIPE
CGHVCNIDRPREFNKHAIEFITAQ

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.-.- [C]

Molecular weight: Translated: 30894; Mature: 30763

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSLLFHKTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFNILLIDLRGHGRSSHF
CCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
SQLKEFINKQYSFKVVSQDIIDVLDHLNIKSAHFVGMSLGTIIIRNLAELAQDRVSSMVL
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAITRFNFRSQFLIKMGDITKNIMPYMWLYKLFAYVVMPQKSQKESRHIFTREAKKLCQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KEFKRWFKLAADVNPLMRCFKDKELPIPTLYVMGENDYMFMKPVQEMVAVHEHSHLLQIP
HHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCCEEECC
ECGHVCNIDRPREFNKHAIEFITAQ
CCCCCCCCCCCCHHHHHHHHEEECC
>Mature Secondary Structure 
SNSLLFHKTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFNILLIDLRGHGRSSHF
CCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
SQLKEFINKQYSFKVVSQDIIDVLDHLNIKSAHFVGMSLGTIIIRNLAELAQDRVSSMVL
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAITRFNFRSQFLIKMGDITKNIMPYMWLYKLFAYVVMPQKSQKESRHIFTREAKKLCQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KEFKRWFKLAADVNPLMRCFKDKELPIPTLYVMGENDYMFMKPVQEMVAVHEHSHLLQIP
HHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCCEEECC
ECGHVCNIDRPREFNKHAIEFITAQ
CCCCCCCCCCCCHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA