Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694485

Identifier: 209694485

GI number: 209694485

Start: 1014523

End: 1014720

Strand: Reverse

Name: 209694485

Synonym: VSAL_I0914

Alternate gene names: NA

Gene position: 1014720-1014523 (Counterclockwise)

Preceding gene: 209694487

Following gene: 209694484

Centisome position: 30.52

GC content: 25.76

Gene sequence:

>198_bases
TTGATAGCACAATTAGTGTCGCAAATTAATATTCTTCAGTTTGATGGTCTTGATGAGTATGATTTTTATGAGACAAATGC
ACTGTTTGTATTAAATTGTTACATAGAAAAAGAACAAGGTAGCTTAGCTTATATTGATTATTTTAATAGTATATATAGAG
TAATAACTCTGAACTTAACTAAAAAATCAATAACTTAG

Upstream 100 bases:

>100_bases
GTTAAATCTAATGATTAGCTATTTATATTAAATATAGATGCTATAAAATACCTCGCAACTAATAAGCTCTTAAAGTTGTT
TTAGGTCTCTTCTTGTCAAT

Downstream 100 bases:

>100_bases
TAATGTTTTGTAACCGTATGTCAGATTTCTATCAGTCTACTTCCTTGTGAGTATTCATCGTTGATATAGGATGGTATAGT
CTGACTCCATATCTTTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MIAQLVSQINILQFDGLDEYDFYETNALFVLNCYIEKEQGSLAYIDYFNSIYRVITLNLTKKSIT

Sequences:

>Translated_65_residues
MIAQLVSQINILQFDGLDEYDFYETNALFVLNCYIEKEQGSLAYIDYFNSIYRVITLNLTKKSIT
>Mature_65_residues
MIAQLVSQINILQFDGLDEYDFYETNALFVLNCYIEKEQGSLAYIDYFNSIYRVITLNLTKKSIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7609; Mature: 7609

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAQLVSQINILQFDGLDEYDFYETNALFVLNCYIEKEQGSLAYIDYFNSIYRVITLNLT
CHHHHHHHCCEEEECCCCCCCEEECCEEEEEEEEEECCCCCEEEEHHHHHEEEEEEEEEE
KKSIT
CCCCC
>Mature Secondary Structure
MIAQLVSQINILQFDGLDEYDFYETNALFVLNCYIEKEQGSLAYIDYFNSIYRVITLNLT
CHHHHHHHCCEEEECCCCCCCEEECCEEEEEEEEEECCCCCEEEEHHHHHEEEEEEEEEE
KKSIT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA